KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418894
Entry
139418894         CDS       T10872                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00052  Galactose metabolism
ocla00510  N-Glycan biosynthesis
ocla00513  Various types of N-glycan biosynthesis
ocla00514  Other types of O-glycan biosynthesis
ocla00515  Mannose type O-glycan biosynthesis
ocla00533  Glycosaminoglycan biosynthesis - keratan sulfate
ocla00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ocla01100  Metabolic pathways
Module
ocla_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ocla_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    139418894
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    139418894
   00513 Various types of N-glycan biosynthesis
    139418894
   00515 Mannose type O-glycan biosynthesis
    139418894
   00514 Other types of O-glycan biosynthesis
    139418894
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    139418894
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    139418894
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ocla01003]
    139418894
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139418894
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139418894
Enzymes [BR:ocla01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     139418894
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     139418894
    2.4.1.90  N-acetyllactosamine synthase
     139418894
Glycosyltransferases [BR:ocla01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   139418894
Membrane trafficking [BR:ocla04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    139418894
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139418894
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2 Mucin Dicty_REP
Other DBs
NCBI-GeneID: 139418894
NCBI-ProteinID: XP_071024776
LinkDB
Position
10:60850327..60859301
AA seq 394 aa
MLDSSLNFRLRRKGCTLVVVLGVINLLVALFYFMGYSNGFSPNQHIQTQTRIETDFITVT
LPSEDIGHHDLNNSVVTLQTPKLHDIHLPNTTTTTTNNTTTTTTTTTTTTTTTTTTTTTS
WKKLEKCPDPSPHLVGPLRVEFSTPVSLDTVRKENPGLQEGGRYKPHDCVALQKVALIIP
FRLRDEHLKFWLYYLHPILQRQQLDYGVYVINQDGDNTFNRAKLMNIGYAEALKEYDYDC
FVFSDVDLIPMDDRNTYKCFRQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQFLEINGF
PNNYWGWGGEDDDIFNRVSSRGMSISRPDSEVGKCRMIRHERDKLNDPNPQRFDRIQRTR
LTMNTDGINSLKYEVVKVEKDPLFTKITVDVGKP
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgctcgactcatctctcaactttaggctgcggaggaaaggctgcaccttggttgtagtt
ttaggtgttattaatctcttagtggctttattttatttcatgggttactcgaatgggttc
tcaccaaaccaacatatacagacacagacgcgaattgaaactgattttattaccgtgaca
cttccatcggaagatattggacatcacgaccttaataacagcgttgtaacattgcaaact
ccgaagcttcacgatatacatttacccaatacaactactacaacaactaataacactact
actactactactactactactactactactactactactactactactacaacaacttcg
tggaaaaagttagaaaaatgtcctgatccgtctccacatcttgttgggcctctcagggtt
gagttctctacgcctgtcagcttggatacagtgaggaaggagaacccaggcctgcaggaa
ggaggtcgctacaaaccacacgactgtgtcgccctccaaaaggttgctctcatcatcccc
ttccgccttcgtgacgagcacctcaagttctggctctactacctccatcccatccttcag
cgccaacagctggactatggcgtctacgtcatcaatcaggatggagacaacacgttcaac
agggccaagctgatgaacattggctatgctgaggcactgaaagagtatgactacgactgc
tttgtgttcagtgacgtggacctcatccccatggatgaccgcaacacctacaaatgcttc
cgccagcccagacacctgtctgtctccatggacaagtttggcttcaagttgccctataac
cagtactttggcggtgtctcagcgttaagtaaggagcagttcctggaaatcaatggcttt
cccaacaactactggggctggggtggggaagatgacgacattttcaacagggtgagctct
agaggaatgtccatctctcgtccagatagcgaggttggaaaatgccggatgatccgtcac
gaaagagacaaactgaatgacccaaatcctcagaggtttgacagaatacaacgcacaaga
ctgacgatgaataccgatggtataaactctctcaagtacgaagtcgtcaaagtggaaaag
gatcctctgttcacgaaaatcacagtagatgtggggaaaccttag

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