Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419412
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Entry
139419412 CDS
T10872
Name
(RefSeq) proheparin-binding EGF-like growth factor
KO
K08523
heparin-binding EGF-like growth factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04012
ErbB signaling pathway
ocla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
139419412
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
139419412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139419412
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Growth factors/receptors
139419412
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Gene cluster
GFIT
Motif
Pfam:
EGF
Syndecan
Nucleoside_tran
AHC1_N
Cadherin_C_2
DUF3671
Motif
Other DBs
NCBI-GeneID:
139419412
NCBI-ProteinID:
XP_071025461
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Position
10:8935164..8937784
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AA seq
218 aa
AA seq
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MNIYLRFAIFIVYGSVSFRISSGTSANTIDRHGDKSPAQLAVVSLLHNDKEIRDNQLEYD
EDEYYYEHGDEDYLSGDYEMQFPKVAFSTKPKDLPVAPYTVRTREGKRKGKGKKRNPCLR
KYKDYCIHGVCQYLRELREPSCICLLGYSGERCHLFTLPVTKEAEGYNRTIALAVVAVVV
SFLCLTVMAILMAIRYHKQGQYNLENEEKVKLEAVAYP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttatctcagatttgcaatttttatcgtttatggatcagtgtctttcaggata
tcaagtggtacctctgccaataccattgacaggcacggggataagtctcctgcccaatta
gctgtggtcagtctcctccacaatgataaggaaataagagacaaccagctagaatatgac
gaggatgaatactattatgaacatggtgatgaggactatctgtctggggattatgaaatg
cagtttccaaaagtggcattttccaccaagccgaaagatctgcccgtggctccttacaca
gtcaggacaagggagggcaagagaaaaggaaagggtaagaagaggaacccctgtctgagg
aagtataaagactactgcattcatggggtctgccaatacctgagagaactacgagagcca
tcctgcatatgtttgcttggatactctggtgagcggtgtcaccttttcaccctgccagtg
acaaaggaagcagaaggctacaacaggacaatagcactggctgtggtggcagtggttgtg
tcctttctgtgtctgacagtcatggccatattaatggccatcaggtatcataagcaaggt
caatacaaccttgaaaatgaggagaaggtcaagcttgaggcggtcgcatatccttga
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