Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419504
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Entry
139419504 CDS
T10872
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139419504
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M10
139419504
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Metallopep
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
139419504
NCBI-ProteinID:
XP_071025564
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Position
10:32996580..33001263
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AA seq
473 aa
AA seq
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MKTFNLCLLLINLAIVVHSLPISPPSEEDEALAETYLKRFFNLTEETGPAFKRGPSQRSR
KVSEMQTFFGLKVTGTLDAETVTMMKKPRCGVPDVQLSRFTTFDNRKWQTNQVTYRIENY
TPDMTVAEVDNSIERALQVWAKVSPLRFTRIYSGIADIMISFGTRNHGDSYPFDGPDGTL
AHAFSPGADIGGDAHFDDDESFSFSSTRGYNLFLVAAHEFGHSLGLSHSTDPGALMYPVY
SYTDPSTFSLPRDDVNGIQHIYGPNTDVNPKPDKPDPTPPSTPNACDPTLVLDAVTTLRG
EKMFFKGRFFWRSYSQSSKPQQSLIKNYWPELPDNINAAYESQLSDRVFLFKDSQVWALY
GYDIVPGYPRNLKSLGLPSTVNKVDAALYDEDSRKTLFFVDDNYYSYDEAMKRMDKGFPK
RVDEGFPGMTSKVTAAFQVRGFTYLYSGSYMFEYSMRTRRQLRVLRNNYFLPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcaatctgtgcttactactaatcaacctggcaatagtggttcactctttg
ccaatctcgccacctagtgaagaagatgaagcccttgcagagacgtacctgaagaggttt
tttaacctgacagaggagacgggtcctgcgttcaaacgggggcccagccagcggagcagg
aaggtcagcgagatgcaaactttctttggcctcaaggtgacaggaaccttggacgctgag
actgtgacaatgatgaagaagccacgctgtggggtacctgatgtccaactcagccgcttc
accaccttcgacaatcgcaagtggcagaccaatcaggttacctacaggattgagaactac
acccctgacatgactgtggctgaggtggacaactccatagagagagcactgcaggtgtgg
gccaaggtctcccccctgaggtttacccgcatctacagtggcatcgctgacatcatgatc
tcattcggcaccagaaatcatggtgattcttaccccttcgatggccctgatggcaccctg
gcccatgccttctcccccggtgctgacattggaggagatgctcattttgacgatgacgag
tccttcagcttcagctcaaccagagggtacaacctgttcttggtggctgcccatgagttt
ggccattccctcggtctcagccactccaccgaccctggagcactgatgtacccagtgtac
agctacacagaccccagcaccttctctctgccccgcgatgacgtcaacggtatccagcac
atctatggtccaaacacagatgtgaaccccaaaccagacaagccagatcctacaccccct
tccacccctaatgcctgtgaccccaccctagttttggatgctgtcaccactctacgtggg
gagaagatgttcttcaagggcaggttcttctggcgtagctactctcagagcagcaaacca
caacagagcctcatcaagaactactggcccgaactccccgacaacatcaatgctgcttac
gagagccagctatctgacagagtgttcctcttcaaagatagtcaggtctgggctctctac
ggctatgacatcgtccccggttatcccagaaacctgaagagcttgggcctgcccagtacc
gtgaataaagttgacgccgccctgtacgatgaagattctcgcaagaccttgttcttcgtt
gatgacaactactacagttacgacgaggcaatgaaaaggatggacaaaggtttccccaag
cgtgtggatgaagggttcccaggcatgacaagcaaagtgactgcagccttccaagtccga
ggctttacctacctctatagtggctcctatatgtttgagtacagcatgaggaccaggaga
cagttacgcgtgctaagaaacaactacttcctgccctgttag
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