Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420344
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Entry
139420344 CDS
T10872
Name
(RefSeq) suppressor of cytokine signaling 6
KO
K04699
suppressor of cytokine signaling 6/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139420344
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
139420344
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
DUF2016
Motif
Other DBs
NCBI-GeneID:
139420344
NCBI-ProteinID:
XP_071026442
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Position
11:complement(20866365..20874892)
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AA seq
608 aa
AA seq
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MTSCLQPDGRTLWIAASSSGPQEECSHPVPVSCPTPLPCQGGPFRMKKISLKTICKSLNI
NKGKEEGGGDFVMLQQPSPAVDFSKEDSLFRGCYTKELAGCDLGGGGGGVEEEEKAGHNK
GRSKSESLMGSLKRRLSAKQKAKVKGGSTAMGSVDDDDTFSSSSVPISFNEVKAHRPLRS
ASLRSHHYSPSPWPLRPVNSDEACIKMEVKVKAMVHSPSPSPNLNGVRKDFHHQDFQMEG
IFQEQAVKNLQEQTESLKNLQQPQNGDQLHLNIDEHVPVVLGFTPQDYIQYTMPLEEGMY
PEGSHSVSHSFCLDGSLPMEVVTEADSSSLHADQQSQEDQDLVSMNLNLPVDLFMESVNG
LLIGSNGVMLQSSRDRVDAQHPPPPPLPLLPSNEIPRTCSGFGVAYSHVAERVRHHLNFD
PNSAPGMSLVYDSVQSSGPMVVTSLTEELKKLARQGWYWGPITRWEAEEKLVNLPDGSFL
VRDSSDDRYLLSLSFRSQTKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEYSIKDSEN
GAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQNLPLPNKMK
DYLQEKHY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctgtctccagcctgatgggaggactctgtggatagcagcatcttcatcagga
ccccaggaggagtgcagccatcccgtcccagtctcatgtcccacaccccttccctgccaa
ggagggccgttcagaatgaagaaaatcagccttaagactatctgcaagtccctcaacatc
aacaagggcaaggaagaaggagggggggattttgtcatgctccagcagccctcgccagcg
gtcgacttctccaaggaagactctcttttcaggggctgctacaccaaagagctggcgggc
tgcgaccttggaggtggcggtggaggagttgaagaagaggagaaggcaggacacaacaag
ggccgttctaagagcgagagtctgatgggttctctgaagaggaggctgtcggccaagcag
aaggccaaagtcaaagggggctccacagccatggggtcagttgacgatgacgataccttc
tcctcctcctctgtgcccatcagcttcaacgaggtcaaggcccatcggccgttacgatcg
gcatccctccgcagccaccattacagcccctctccctggcccctgcggcctgtgaactca
gacgaagcttgcatcaagatggaggtgaaagttaaagccatggtccactctccgagcccc
agccccaacctgaatggtgtgcggaaggatttccaccaccaggacttccagatggagggc
atctttcaggagcaggctgtgaagaacctccaggagcagacagagtccctgaagaacctc
cagcagccccaaaacggagaccagctgcacctgaacattgatgaacacgtgcctgtagtc
ttgggcttcacgccgcaggactacatccagtacaccatgcctttagaggagggaatgtac
ccagaggggtcccactctgtctctcactccttctgcctggacgggtccctgcctatggag
gtggtgactgaggcggacagtagctctctccacgctgatcagcagagtcaggaagaccag
gatctggtgagtatgaacctgaacctgccagtggacctcttcatggagtctgtgaacggc
ctcctcatcggctctaacggcgtgatgctccagagctccagggacagggtcgatgcccaa
cacccccctcctccccccctgcccctgctacccagcaacgagatccctaggacttgctct
gggttcggtgttgcgtacagccacgtggcggagcgggtgaggcaccacttaaactttgac
cccaactcggctccgggcatgagcctggtgtatgactcagtccagagcagcggacccatg
gttgtgaccagcctgaccgaggagctgaagaagctagccaggcagggttggtactggggg
cccatcacacgctgggaggctgaggagaagctggtcaacctgcccgacggctcgttcctg
gtcagggacagctcggacgacaggtacctcctcagccttagtttccgctcccagaccaag
accctccacactcgcatcgaacactccaacggacgcttcagcttctatgagcagcccgac
gtggagggacacacgtccatcgtagacctgatagaatactccatcaaagattcggagaat
ggagccttctgttattctagatctcgcttaccagggtccgccacctaccccgtcaggctg
accaatcccgtgtctcgttttatgcaagtgcgctccctgcagtacctgtgtcggttcgtg
atcagacagtacaccaggattgacctgattcagaacctgcctttgcccaacaagatgaaa
gactacctgcaggagaagcactactga
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