Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421202
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Entry
139421202 CDS
T10872
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00514
Other types of O-glycan biosynthesis
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139421202
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139421202
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139421202
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
139421202
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139421202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
139421202
NCBI-ProteinID:
XP_071027958
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Position
12:72293046..72301193
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AA seq
380 aa
AA seq
DB search
MSKSYAKKTVVSITSGLFTCLMLLLVVAQHQRVQVDEVPNQREMGTRSLQSMDTLATDGV
KAVQQQVNSEAQTKKGFSAYFSKLTRGRREVDKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKVGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNMRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttatgctaagaaaacggttgtttctataaccagtggactattcacctgt
cttatgttgctcttggtagtcgcgcagcatcaaagagttcaggtagatgaggttccaaac
cagagagagatggggacgcgctcactccagagcatggacaccttggctacggacggagtg
aaggctgttcagcaacaggtcaactcggaggcgcagacgaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggtggacaagcctgcagggtccgctcagtca
gcgacagatgcgtcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagacggagaagatgaggagctgaagaagaaagtt
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttttgtcacgtg
gatgatgataactatgttaacatgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgagaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcattgagtcg
gtgctgggggtgcctctgacccgcagtaactttttccactcccatctggagaacctgcaa
caggtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttccctgtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgtccgcttcaggttgcctac
tag
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