Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421416
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Entry
139421416 CDS
T10872
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
ocla04020
Calcium signaling pathway
ocla04148
Efferocytosis
ocla04370
VEGF signaling pathway
ocla04371
Apelin signaling pathway
Module
ocla_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139421416
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
139421416
04371 Apelin signaling pathway
139421416
04020 Calcium signaling pathway
139421416
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139421416
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
139421416
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Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
139421416
NCBI-ProteinID:
XP_071028395
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Position
12:complement(79207444..79224982)
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AA seq
391 aa
AA seq
DB search
MVLVNPQSGRGQALQLFSGQIEPMLTEASVPYTLVITEHQNHARDLVRETDLSQWDALVI
LSGDGLLFEVLNGLLEREDWEEAIQTPLGILPGGSGNALAASVHHYTKSPPVWGKELLLS
CGFLLCKGLVTRLDLVSVHLASSERIFSFLSLAWGFVADVDIESEKYRLVGPMRFLVGTL
MRLASLKVYQGRLAYLPAPPFTPQNSSLCSSLPCGPNSSPNQNSRHNHITNSNHNTAHNS
SNIAITTMRTEPQPVNQKGPPDSLLADLEQPVPDHWTVVNEEDFVLVLAMFQSHLAEDLF
AAPGAAADDGFIHLLYVRAGISRLALLTLFMTMEKGGHLANGCPHLVYERVKAFRLEPLS
PEGAITVDGEMVEYGPVQAQVHEGIARLISG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggttctggtgaacccccagagtgggcggggccaggctctccagcttttctccgggcaa
atcgagcccatgctcaccgaggcttcagtcccttacacgttggtcatcactgagcaccag
aaccatgcgagggacctggtgagagagactgatctgtcacagtgggacgctctggtcatc
ctgtcaggagacgggctgctgttcgaggtgttgaatggtcttctggagagagaggactgg
gaggaggccatccagaccccactgggcatcttaccagggggctcgggcaacgccctggca
gcctctgttcaccactacactaagtctcccccggtctggggtaaggagctgctgctgagc
tgtggcttcctgctgtgtaaaggcctggtgactcggctcgacctggtctctgtccacctg
gcctccagcgagcgcatcttctccttcctctccctggcctggggcttcgtggccgacgtc
gacattgagagcgagaagtaccgcctcgttggccccatgcgattcctggttggtacgctg
atgcgcctggcctccctcaaggtatatcagggtaggctggcatacctgcctgctcctccc
ttcacaccccagaactcctccctctgctcctctctaccctgtgggcccaacagctccccc
aatcagaactctcgccacaaccacatcacaaactccaaccacaacaccgcccacaactcc
tccaacattgccatcacaaccatgaggaccgagccccaaccagtcaaccagaaggggcct
cctgactcgctcctagcagacctggagcagccggtgcctgatcattggacagtagtgaat
gaggaagactttgtactggtattggccatgttccagtcccacttggctgaggacctgttt
gccgcccctggggccgcagcagacgacggcttcatccacctgttgtatgtgcgtgcaggc
atctccagactagccctgctcacactcttcatgaccatggagaagggggggcacctggct
aatggctgcccacaccttgtgtatgagagggtgaaggcttttcgcctggagcctctgtcc
cccgagggagcgatcactgtggacggggagatggtggagtacgggccagtacaggcccag
gttcatgaaggaatcgccaggctcatctcaggctga
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