Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421860
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Entry
139421860 CDS
T10872
Name
(RefSeq) SHC-transforming protein 3
KO
K17448
SHC-transforming protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04012
ErbB signaling pathway
ocla04510
Focal adhesion
ocla04910
Insulin signaling pathway
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
139421860
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139421860
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
139421860
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139421860
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Gene cluster
GFIT
Motif
Pfam:
PID
SH2
DUF7145
Delta_lysin
DUF7063
Motif
Other DBs
NCBI-GeneID:
139421860
NCBI-ProteinID:
XP_071029088
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Position
12:11173565..11236372
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AA seq
696 aa
AA seq
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MLHRTKYNRFRNESVTSVDDLHGLTMNPKVSAAPASSAEPPYTPPTAPSEGGVNHHHHPA
ADPSDDGTNTLCTLINKVSNLKFTNSGSSLLGIKSLPSHVKDLTLSKLQGAGGSGGGSSC
IGSGSGPSVSLAASGGGNGGGGNGSSCGSASSISHHHHPPCSHSHSSQQEPGTMSNAGGK
KGSRLGLEEREAGQRQGHGGEDWGPSGGGGNSGLVNKPCSRGWLHSSEKISGPGVTYIVK
YLGCIEVLRSMKSLDFNTRSQITREAISLVCEAVPGAKGALRKRKPPSKALSSILGKSNL
QFAGMSINLNISTSSLNLMTPDSKQIIANHHMQSISFASGGDPVSDPDTTHYVAYVAKDP
VNRRACHILECCDGLAQDVISTIGQAFDLRFQQYLQCPSSKMTSVHDRVLNMESVWTEEE
EEEPAEHPYYNNIPGKMPPPGGFIDTRLGQSIQAEQAPGAGVDQTYYQGRHCGEIWGADR
RPTGILVQQGSCDIYSLPEGKSSVPKTGDVPTYVNTQQIDAQVLAVLQAEQDSMAAEGAA
GTAAKDSPRKDLFDMKPFEDAILTQSAVPALHKAGSVDNSSPLLVRSAAFKAQEELEGQA
WYHGEMSRRDAEKLLVDDGDFLVRKSTTNPGSYVLTGMHNGLAKHLLLVNPEGTVRTKDH
IFDSISHLIGHHRDNSLPIVSAGSELCLKQPVGNRK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaccgtaccaaatacaacagattcaggaatgagtcggtgacgtccgtcgatgat
ctacacggcctcaccatgaaccccaaggtctcggcagcccctgcgtcctccgccgagccc
ccgtacacccctcctacagcgccatccgagggcggcgtgaaccaccaccaccaccccgct
gccgacccctcagacgatggaaccaacaccctgtgcaccctcatcaacaaagtgtccaac
ctgaaattcaccaactcaggctccagcctgctgggtatcaagagcctcccctcccacgtc
aaggacctgaccctctccaagctgcaaggtgctggaggctccggtggtggatccagctgc
attggtagcggctctggccccagtgtgtcgttggcagcctccggtggcggtaacggtggt
ggtggtaacggctcctcctgtggctcagcctccagcatctcccaccaccaccaccctccc
tgctcccactcccactcctcccagcaagagccaggcaccatgagcaacgcagggggaaag
aagggcagcaggttggggctggaagagagggaggctgggcagagacagggacatggaggg
gaggactggggacctagtggaggaggaggtaacagtggactggtgaataaaccctgttcc
aggggatggctgcattccagtgagaagatctctggacccggagtgacgtacattgtaaag
tatttgggttgcattgaagtccttcggtcgatgaaatcactggatttcaacacgagatcg
caaataacaagagaggccatcagcttggtgtgtgaggcagtcccgggggccaaaggagca
ctgcggaagagaaagcctccatctaaagccctgtccagcatcttggggaagagcaacctg
cagtttgctgggatgagcatcaatttgaatatctccaccagcagcctcaacctgatgacc
ccagactccaaacagatcatagccaatcatcatatgcagtccatttcctttgcatcagga
ggagatccagtgagtgatccagacacgactcattatgttgcctatgtagcaaaagatcct
gtcaaccgaagagcgtgtcatattctggagtgttgtgatggtctggcccaggatgtgatc
agcaccatcggccaggcctttgacctccgtttccagcagtacctccagtgtccctccagc
aagatgacctctgtacacgacagggttctgaatatggagtcagtctggacagaggaggag
gaggaggagcctgctgaacatccgtactacaacaatatccccggaaagatgccaccacct
ggaggattcatagacacccggctaggccagagcatccaggctgagcaggccccaggggct
ggggtggaccagacttactaccagggtagacactgtggcgagatctggggggcggacagg
aggcctactgggatactcgtccaacagggatcatgtgacatctacagtctgcccgagggg
aagagttcagtaccaaaaacaggggatgtgcctacgtacgtgaacacccagcagatcgac
gcccaggtgctggcagtcctgcaggctgaacaggacagcatggcagcagaaggggcagcg
ggcacagcagccaaagatagtccaaggaaagacctgttcgacatgaagccttttgaggat
gccatcctgacccagtcagcggtccctgcccttcacaaggctggatctgtggataactcc
agccccttgttggtgcgctctgctgccttcaaggcccaggaggagctggaaggccaggcc
tggtaccacggcgagatgagccgacgagacgcagagaaactactggtagatgacggagac
ttcctggttaggaagagcaccaccaaccctgggtcgtacgttctgacgggcatgcacaat
ggactggccaaacacctactgctggtgaatcctgagggcacggtgcggacaaaagatcac
atatttgacagcatcagtcacctgataggccatcaccgtgacaacagcttgcccatagtg
tctgcaggaagtgaactttgtctgaagcagcctgtgggcaacaggaaatag
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