Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421951
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Entry
139421951 CDS
T10872
Name
(RefSeq) vacuolar ATPase assembly integral membrane protein vma21
KO
K23952
vacuolar ATPase assembly integral membrane protein VMA21
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139421951
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139421951
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VMA21
DUF6773
DUF3021
SECTM1_C
YcdU_N
DUF1270
DUF2207_C
Exclusion-determining_protein
Motif
Other DBs
NCBI-GeneID:
139421951
NCBI-ProteinID:
XP_071029190
LinkDB
All DBs
Position
12:26838040..26840117
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AA seq
105 aa
AA seq
DB search
MDNYNKQSLNSMPGPVPDFRGNDGSLVSVLKTLLFFTVMMITLPIGLYFTSKSYIFEASG
YSSNDSYFYAAIVAVIAVHVVLALFVYVAWNEGTGSHQTREGKQD
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggataactataataagcaatctttgaactcaatgccaggtcctgttccagatttcaga
gggaatgatggatcattggtgtctgtactgaagacattgctgtttttcacggtcatgatg
ataaccctgccaataggattatattttacatcaaaatcatatatttttgaagcttctggg
tattccagcaatgacagttatttctatgctgccatcgtggcagtgatagctgtccatgtg
gtcttggccctctttgtgtatgttgcatggaatgagggcaccggctcacatcagacaaga
gaaggaaagcaggactag
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