Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422009
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Entry
139422009 CDS
T10872
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139422009
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NCBI-GeneID:
139422009
NCBI-ProteinID:
XP_071029255
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Position
2:13625108..13633337
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AA seq
862 aa
AA seq
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MDAGDDQNTGSTNGNAPSAGNTRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLSTASGGGTMTNTRPLGPA
TSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIFMPGGTATAAVATVAQQQ
PQQQQQQQGVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEFPDRRDAANYSFSQQQQQ
HSQQQQQQFSQNTQQQQQHMANKLTSYTHPTALPSINVKTGNQLNMAPTAATSVPASPSP
TLPLSQLLISPSGLCQARAVTTVTPAATVTHILVPTSNVPTSSQGYPIGSVAPKTNINTQ
TLVVQPLQQSNTNMDKVSHSSGPVHIQPKTSQGHRLPVQLPPRHPPPILPAPPNTGCHHP
PHVPVQLVGARQGSVGNSQALAQARSCCPQDNGTAIASTGGNTTVTLLDTKRVGMCVCMC
MCVCVCVCVCVCVCVCVCVCVCVCVLIKTCLFLLHQAKPAIGSLKRKSETDATNEMAVEL
SQLCCPPMRDSAPPLSPAPTLDSAPKVVPAFSSPPTLSLPLPLSRGVGGQIDRAPLPQAV
VKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMGVQQADNGGPAVLKCEYCESLAPASQ
FRGSKRFCSKTCAKRYNVSCSHHFQVSRGRASARPPGPPVPPDNIVRRRGPRRSSSEIAC
AKIAGRHLPVKECRSESSRSEDVSSCDGEEEEEDSPSLSPSSSLSCPRPAHCDPHLDDSA
QGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCEDLAAQFLSQEIDGQALLLLREEHLI
STMNIKLGPALKICAFINSLRD
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgatgaccagaacacgggctctaccaatgggaatgctccgtctgctggg
aacacccgccctccccagatagcccacatgtctctgtatgagaggcaagctgtgcaggcc
cttcaggcgctgcagagacagccgaacgcagcccagtacttccagcagctcatgctgcag
cagcaaatcaacagtgcccagcagcttcacaacctggctgctgtgcaacaggccaccctc
gctgctagtcgccagtccaactctcccaaccacagtgtctcccaagcaaccaccactgtc
aatctgagcaccgcctctgggggagggaccatgaccaatacccgccccctcggccctgcc
acgtcagtgacatcatcagctctcagccaatcagtgctgctgggtgggaactcagccgga
cagggccagatgtacctgagagtcaaccgctccctcagggcacccctcgcagcctcccag
ctcatcttcatgcctggtggcacagcaacggctgctgtagcgacagttgcacagcaacag
cctcagcaacaacagcagcaacagggagtccatcccacctccaatgcccaatccgacaat
gaccaggtgcagaacctggctctccattgtatctccactcccagagtggccgcagtgaag
actgagtttccagacaggagagacgcagccaactattcttttagtcaacaacaacaacag
cattctcagcagcaacagcagcaattctctcagaacacccagcagcaacagcaacatatg
gccaacaaactgactagctacactcatcccactgctctccccagtataaatgtcaagact
ggaaaccagctgaatatggccccaaccgctgccacctcagttcctgcctccccctctccc
acgctccctctctcccagctcctcatctccccctcaggcctttgtcaggcccgggcggta
accacagttacccctgctgccacggtaacgcacatcctagtccccacctccaacgttcct
acttcctcccagggctaccccataggttcagtcgctcccaaaactaacatcaacacccag
accttggtggtgcagccactgcagcagtccaacactaacatggacaaggtgagccacagc
tctggccctgtgcacatacagcccaaaacctcacagggtcaccgcttacctgtccagctg
cccccacgccaccctccacctatcctcccggctccgcccaatacggggtgccatcacccg
ccccatgtcccagtccagctggtgggagctaggcagggctcagtaggaaactcccaggct
ttggcacaggcccgaagctgctgcccccaggacaacggcaccgctatagcctctactgga
gggaacaccacggtaaccctcttagatactaaaagagttgggatgtgtgtgtgtatgtgt
atgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgttaataaaaacttgtctcttcctgttgcatcaggcaaagcctgca
attggctcattgaagaggaagtcggaaactgatgcaaccaatgagatggcagtcgaactt
tcccaactttgctgtccaccaatgagagattctgcccctcctctatctcctgcccccacg
ttggactcagctcctaaagtggtgccagccttctcctctccccccaccctgtctctgcct
ctgcccctgtctcggggcgtggggggtcagatagacagagcccctctgccccaggcggtg
gtcaaacctcaggtcctcacccacctcatagagggttttgtcatccaggagggagctgag
cctttccctgtgactgggccagtgaaggagcctctagccatgggtgttcagcaggctgac
aatggaggccctgcagtgttgaagtgtgagtactgtgagagcttggctccagccagccag
ttcaggggctccaagaggttctgctccaagacctgcgctaagagatacaatgtgagctgc
agtcatcacttccaggtcagcagggggcgagcttctgcacggccgcccggtcctcctgtt
cccccagacaacatcgtcagacgcaggggtcctcgcaggagtagctctgagatcgcctgc
gctaaaatagccggcagacatttgcctgtcaaggagtgtcgttctgagtccagtcgctca
gaggatgtgtccagctgtgacggagaggaggaggaggaagattccccatcactctcccct
agctcctccctctcctgccctaggcccgcccactgtgatccccatttggacgactcagct
caaggcagcctcccattggacgaggccaacttcctgtccgggagccccgcccattggggt
gtggaggaggtctgcaggttcatctcttcactacaaggttgtgaggacctggctgcccag
ttcctgtcacaggagattgacggacaggccctgctgctactcagagaagaacacctaatc
tccaccatgaacatcaaactaggacccgccctcaagatctgtgccttcatcaacagccta
cgagactga
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