Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422648
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Entry
139422648 CDS
T10872
Name
(RefSeq) lysophosphatidic acid receptor 1
KO
K04289
lysophosphatidic acid receptor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04540
Gap junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139422648
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
139422648
09142 Cell motility
04810 Regulation of actin cytoskeleton
139422648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139422648
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Lipid
Lysophosphatidic acid
139422648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7tm_4
NDUFC2_sar
Motif
Other DBs
NCBI-GeneID:
139422648
NCBI-ProteinID:
XP_071029904
LinkDB
All DBs
Position
12:complement(2216537..2315085)
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AA seq
348 aa
AA seq
DB search
MEEEQCFYNESIAFFYNRSGKYLATEWNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNR
RFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVCN
LLAIAIERHITVFRMQLHTRMSNRRVVVVIVVIWTLSIVMGAIPSVGWNCICDIGTCSSM
APLYCNSYLVFWAVFNLVTFLVMVVLYAHIFMYVRQRTMRMSRHSSGPRRNRDTMMSLLK
TVVIVLGAFIVCWTPGLVLLLLDVFCANCNVLDFEKFFLLLAEFNSAMNPIIYSYRDKEM
SATFKQILCCQRQENVNGTAAEGSDRSASSINHTVLSGGKQNNDHSVV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaacagtgcttctacaatgagtccattgccttcttctacaaccgcagtgga
aagtacctggctacagagtggaataccgtcagtaagctggtgatggggctgggtatcaca
gtatgtatcttcatcatgctggctaacttgctggtcatggtggctatatacgtcaaccgc
cgcttccacttccctatttactacctgatggccaacctggcggccgcggacttctttgcc
ggcctggcgtacttctacctgatgttcaacacgggcccgaacacgcggcgcctcacggtc
tccacgtggctgctccgacagggtctcatcgacacgtccctcacggcgtccgtgtgtaac
ctcctcgccatcgccatcgagcgccacatcaccgttttccgcatgcagctacacacgcgc
atgtccaaccggcgtgtggtggtggtgattgtagtcatctggaccttgtctatcgtcatg
ggagccatcccgtcggtagggtggaactgtatctgtgacatcggcacgtgttctagcatg
gctccactgtactgtaactcctacctggtgttctgggccgtattcaacctggtcaccttc
ctggtcatggtggtgctgtacgctcacatctttatgtacgtgagacagaggaccatgagg
atgagcagacacagctctgggccacgcaggaacagagacaccatgatgagtctgctgaag
actgtcgtcatcgtattgggtgcgttcatcgtgtgctggactccaggcctcgttctcctc
ctcctcgatgtgttctgtgccaactgtaacgtcctggactttgagaagttcttcctgctt
ctggctgagtttaactctgctatgaaccccatcatctacagctatcgggacaaggagatg
agcgccaccttcaagcagatcctgtgctgtcagcgccaggagaacgttaacgggacggca
gccgagggctccgaccgctcagcctcctctatcaatcacaccgtgctgagtggggggaaa
caaaacaatgatcactcagtggtgtga
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