Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423178
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Entry
139423178 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139423178
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139423178
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139423178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
TPR_1
TPR_2
zf-C3HC4
zf-C3HC4_2
TPR_11
zf-RING_UBOX
TPR_16
zf-RING_5
Prok-RING_1
zf-C3HC4_3
zf-ANAPC11
TPR_17
ANAPC3
zf-RING_11
TPR_9
PHD
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
139423178
NCBI-ProteinID:
XP_071031002
LinkDB
All DBs
Position
12:complement(39725191..39757737)
Genome browser
AA seq
1829 aa
AA seq
DB search
MSDSDSGPEFLDCDIRHGAKLIYDKDSPFVALQPPDVIYERWNKIPVILKKKAAQLMKLY
AFWYHILLRQENHNTTRWAVQVGFLDSNVSNDLSLKRLHKIEILEAILRAMEKGCLLEDQ
TRHMIWISNKFNLHVPEVLDDAIRWLERTGEPRIKLRVQELGPIGNCFAALQLIFTEYAH
YTQAMGVDRKKMMRELAQDPSQWSIEKSEEMKTRGNDQFQKKKYDAAVKCYSKAIRYHPE
NHIIYGNRALCYIRSEKYLKAVGDGKRATLIQPEWAKGHYRYCEALFLLGEHKQAIEANE
WGQTLCKADPEGMKDLLQQHVKFNIEIEESKCHWAEERKAGRSNKTAAKKVSSKRTESNT
RADTTESQQAAKPTSKVEPSAKNTVPGNKGLEVKVESQTQPGTRRAHSVDNTKVPKEMKV
EMADKNSSKPEPSSSEKTKGKNRNQQSKEKAVSGSSRDPSVRDALMSAVQDAHMALADQR
CRNAEQAFSQALSFLVTSTPKELGLCTLDQVVLIYGHASALIEIGQPEELAEAQKDFEKI
KHFEERKFQCLVFYGIGKAYQKENRFPLALEQFSDSMQMVKKKITPGKLTWPTTKVIVEE
SKLDYFKELLEESIEMCKFPPKPDAICRHQNCHGHSKIEIYFTDPDFKGFIRMVCCQSCK
VEYHINCWKKLKATAFSDKNEKDFLQGMCFTPDCGGRICHIKIYGSTGLVKCEFEASIDK
PMGKATLRVNQKCTSLKKLKSREDRKLRRKQHRQDASLSTQAKNDQIPLENGETIVIEQK
ASSPAWLAYGDRVLLQISERIDLFRAESHNISVLMENLKPWMDLDQIKGNKLGTSYTERQ
VESLGDVVELLLEKKNRVWARVFIHGLSSCLVTSPKLHDWAHQLNSAGLNSAALFIDRYA
DHLEQLDLAPLLNFAPLQDMLIEKFGTMPEFFSRLGLTLTEYLKQAPSQEMRLFIWTLEE
HRDQYTTCHTVLDDYFELMDGHCLVIKKTGIENEINSPIKTKNRNRKKKQKEPKGSVIVL
SGMRGGTSREEDDEDFLHDSLMFLDSTDPFSIPNHLRNQVAEFEGQYNIGSRSSHYNRIL
DNNPDPTKESLYDYFAQILEEYGPLGAQDPLLVGELDNFPPDAQQKIQEAGGLEHFLLES
LRFVMTDNLLGLMKHAVSLQDTNTHRMDNLDFIGDIPNGLSLNPSAMEFLPNSHDSGPRD
YDEPFAIINVRPNPVEFTGYLEVIAKLPSPYVLPVFGAPPAPPANEIARAIGTLRAEDMS
YNNHDPRNLEAFDLCISGVDEQGLCETVYAPVLGAKAPGKTAVEVQVVTCDTLSEVAVNT
EPYEPFEGNNGDMNKKEKSNAEFEQQIQQMKQDYGAVKQRRQTEISALEGEQEEINHSIQ
IIHKELGLFQQKLEEEVKKDQQEKKENQETLKALKIEIKELAESQESISKNIHKKNKEYE
TQLNNFLELSNQSAAEKMSLEDEIKRCRDLCAKATRRSQGAELSILENRRSRGLRCLYRS
LSDARAVLAKLKEVSPRLPSQILQSATEAWIACAQEAEEKIRSTEAQYQDQMEQVKRGTR
LCTLPPVAVPSAPWPPPVPAHQQLPCPPVHMRAPLYGHPGLPRAPPAPAMDQSVALPSGM
ARVPASATTNRPITRPNQASRPPAPQPTNVYDRIVDRLSVMFPHYSRPVLSKFIGEMRTA
NRGCLNSLSYQEVINRVAQLILDHQDSTREQLSSAGTGDTAGPPSRSDSPASVHSTGPPA
HVWKSVGAQGHSKSKALNMEDPCIICHEDMSQEDLCVLECRHSFHRECIKSWLKEQSTCP
TCREHALLPEDFPLLPGRIRRGHTPAAFS
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattccgactccggtccagagtttttggactgcgacatcagacacggggcgaaa
cttatctatgacaaagacagtccctttgtagccctgcaacctccagatgttatatatgag
cgatggaataaaatccctgtcattttgaaaaagaaggcggcccagttaatgaaattgtat
gccttttggtaccacattctgctgcgtcaagagaatcataacaccacacgctgggctgtg
caagttggcttcttagattcaaatgtcagcaatgacttgagtctgaagagactgcacaag
atagaaatattggaggctatcctcagagcgatggaaaaaggatgtttattagaagatcaa
acaaggcacatgatctggataagcaataaatttaacttgcatgtgccggaggtcctggac
gatgcaatacgctggctggagcggacaggagagccccgcatcaagctgcgggttcaggag
ctgggccccatagggaactgctttgctgccctgcagctcatcttcactgagtatgcccac
tatacacaggccatgggagtcgacagaaaaaaaatgatgcgagagcttgcacaggacccc
agccaatggtctattgagaaaagtgaagagatgaagactagaggaaatgatcagtttcag
aaaaagaaatatgatgcagcagtcaagtgttactcaaaagccatcagatatcaccctgaa
aaccacattatctatgggaaccgagcactttgctatatccgtagtgaaaaatatctaaaa
gctgttggggatggaaaacgagccactttaatacaaccagagtgggcaaagggtcactac
cggtattgtgaggcgctgttcctactgggggaacacaagcaggcaatagaggccaacgag
tggggccagaccctgtgcaaggctgacccagagggtatgaaggacctgctgcagcaacat
gtaaagttcaacatagagatagaggagagcaagtgccactgggcagaggaacgcaaagct
ggaagatcaaataaaactgcagctaagaaagtttcaagtaaaaggacagagagtaacacc
agagcagacactacagagtcacaacaggccgctaaacccaccagtaaggttgagccttct
gctaaaaacactgttcctgggaacaagggcttggaagtcaaggtggaaagccagacacaa
ccaggtacaagaagagcacattcggtggataataccaaggtgcctaaagagatgaaagtt
gaaatggctgataaaaatagcagcaaaccggagccctcctcttcagagaaaacgaaaggg
aagaacagaaaccagcagtcaaaggaaaaggcggtatctggcagctccagagaccctagt
gtgcgggatgcactgatgtcagctgtgcaggatgcccacatggccctggccgaccagcga
tgccgcaacgcagagcaggccttctcccaggccctcagcttcctggtgaccagcacacca
aaggaacttggcctctgtactcttgaccaagttgtgctgatttatggccatgcctcagct
ctgatagagattggtcaaccagaggaacttgctgaagctcaaaaggactttgaaaagatc
aaacattttgaagagcggaagtttcagtgcctggttttttatggcattggaaaggcatat
cagaaggagaaccgatttccacttgctctggaacagttttctgattctatgcaaatggtt
aagaaaaagataacacctggtaaactgacctggcccactactaaagttattgttgaggaa
agtaagctggactatttcaaggagctgctagaagaatccatagagatgtgcaaatttcca
cctaaaccagatgccatttgtcggcatcagaattgccacggacattccaaaatagaaatc
tacttcacagatccagattttaagggtttcattcggatggtttgctgtcaaagttgcaaa
gtggagtaccatatcaactgttggaagaagttgaaagcaacagcattctctgataagaat
gaaaaggatttcctgcagggaatgtgctttactccagactgtgggggtagaatctgtcat
attaaaatctatggttcaacagggcttgtcaaatgtgagtttgaagcatctattgacaaa
cctatgggtaaagcaacattgagagtaaatcagaaatgtacaagtctcaagaagttgaaa
tccagagaggatcgtaaactcaggcggaagcaacataggcaagatgcttctctgtctacg
caagccaagaatgatcaaatacctttggagaacggggaaaccattgtcatagaacagaag
gcttcatcccccgcctggctagcttacggggaccgtgttctgcttcagatcagtgagcgt
atagacctattcagggctgagagccacaacatctctgtcctgatggagaaccttaagcca
tggatggacctggatcagatcaaggggaacaagctgggcacttcttacactgagaggcag
gtggagtccctgggggatgttgtagagctcctcctggaaaagaagaaccgggtgtgggcc
cgtgtctttatccatggcctaagcagctgcctggtcaccagccccaagctgcacgactgg
gcccaccaactgaacagcgcaggtctgaattcagctgcactgttcattgaccgctatgca
gaccacctggagcagctcgacctcgctcctttgctcaattttgcccccctgcaggacatg
ctcatagagaagtttgggaccatgcctgagttttttagccgcctaggcctgactctaacg
gagtacctgaagcaggccccttcccaggaaatgaggctgtttatctggactctggaggag
cacagagaccagtacaccacctgccacactgtgctggatgattattttgaattaatggac
gggcattgtttagtgattaaaaagacagggattgaaaatgaaattaattctcctattaag
actaagaacagaaaccgcaaaaaaaagcagaaggagccaaaggggtccgttattgtcctg
tcgggaatgagaggtggtacctcaagagaggaggacgacgaggattttttacatgactct
ttaatgttccttgactccactgacccattcagcattcccaatcatcttcgaaatcaggtt
gcagagtttgagggacagtacaacattggcagtcgcagtagccactacaatagaatattg
gacaacaaccctgacccaactaaggagagtttgtacgactactttgcccagatcctggaa
gagtacggtcccttaggggcccaggaccccttgctggtcggtgagctggacaacttccct
cctgatgcccagcagaagatccaggaggcaggtggccttgagcacttcctcctcgagtcg
ctgcgcttcgtcatgaccgacaacctcctgggcctcatgaagcacgctgtgtcactgcag
gataccaacactcacagaatggacaatctagacttcataggggatatccccaatggactc
tctctaaacccttctgctatggagttcctcccaaactctcatgactctggacctagggat
tatgatgagccttttgccatcattaatgtgcggcctaacccggttgaattcactggctat
cttgaggtgatcgccaagctccccagcccatatgttttacctgtttttggtgctccacca
gccccgcctgccaacgaaatagcacgtgccattggaactctgagagcggaggacatgtca
tataataaccatgatccacgtaaccttgaggcgtttgacctttgtattagcggcgtggat
gaacagggattgtgtgagactgtttatgctcctgttctcggtgccaaggcacctggaaag
actgcagtggaagtacaggtagtaacttgtgacacgttgagtgaagtggctgttaacacg
gagccttatgagccttttgaagggaataatggagacatgaacaagaaagagaagagtaat
gcagagtttgagcagcagatccagcaaatgaagcaggattacggcgctgtgaagcaaaga
cgccaaacggagatatctgccctagaaggagagcaagaggaaatcaaccattcaatacag
atcatccataaagagctgggcctgttccagcagaagctggaggaggaggtgaagaaggac
caacaggagaagaaagagaatcaggaaacactgaaggccttaaagattgagataaaggag
ctggcggagtcacaggagagcatttctaagaacatccacaagaagaacaaggagtatgag
acccagctgaataacttcctggagctgagtaaccagtcagctgctgagaagatgagcctg
gaggatgagatcaagcgatgcagagacctgtgtgccaaggcaactaggaggtctcaggga
gcagagctgtctatattggagaaccggcgtagccgcggcctgcgctgcctctacaggtct
ctgtctgatgccagggccgtcctggccaaactcaaggaagtctcacccagattaccttcc
caaattctccagtcagccacagaggcttggatagcatgtgctcaagaagcagaggagaaa
atccgctcaactgaggcacagtaccaggatcagatggaacaggtgaagagggggaccagg
ctgtgcactctacccccagttgcagtccccagtgccccctggcccccacctgtaccggct
caccagcagctcccttgccctccagtgcacatgagagcccccctctacggtcacccgggg
ttgcctagagcccctcctgccccagccatggatcagagtgttgcactgccctccggtatg
gctcgagttccagctagtgctaccactaaccgtcctatcacaaggccgaaccaggcttcc
aggccaccggccccacagcccaccaatgtgtacgatagaatcgtagatcggctcagcgtc
atgttccctcactatagcaggcctgtgctgtccaagttcattggggagatgcgcacggcc
aacagaggctgcttgaactccctgtcctaccaggaggtcatcaacagagtggcccagctc
atcctggaccaccaggactccaccagagagcagttgagcagtgctggtacgggtgacact
gctgggcccccttcgcgctctgactctccagcctctgtccactctactggaccccccgcc
catgtctggaagagtgtgggtgcccaaggacactccaagtcaaaggcgttgaacatggag
gatccctgtatcatctgccatgaggacatgtcccaggaggacctgtgtgtgctggagtgc
agacacagcttccacagagagtgtattaagtcgtggctgaaggagcagagcacctgtccc
acctgcagagagcacgctctcctgcccgaggatttccctctgctacctggcagaatacgc
aggggccacacgcccgctgctttctcttaa
DBGET
integrated database retrieval system
