Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423766
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Entry
139423766 CDS
T10872
Name
(RefSeq) platelet-derived growth factor subunit A-like
KO
K04359
platelet-derived growth factor subunit A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04510
Focal adhesion
ocla04540
Gap junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139423766
04020 Calcium signaling pathway
139423766
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139423766
04540 Gap junction
139423766
09142 Cell motility
04810 Regulation of actin cytoskeleton
139423766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139423766
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139423766
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139423766
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Growth factors/receptors
139423766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
139423766
NCBI-ProteinID:
XP_071031499
LinkDB
All DBs
Position
13:12861939..12873633
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AA seq
199 aa
AA seq
DB search
MRAAFLSFLLACLLCLLRTAAEEDPLPPELLERLSRSEIRSISDLQRLLELDLEENEVIG
ENKQRYHNKAFPHSYSQLKSSQTHSRHKRSIEEALPAVCKTRTVIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMHCLPSRKHHRTVKVAKVEYVRRRPKLKEVLVRLEEHLEC
ICTSKRHIKELYDTDNGVR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcttttctgagcttcctcctcgcctgcttattgtgcctgttacgcaccgcc
gctgaggaggacccactccccccggagctgttggagcggctgtcccgcagtgagatccgc
agcatcagcgacctccagcggctcctggagctagacttggaagagaatgaggtgatcggg
gagaacaaacagaggtaccacaacaaggccttcccccacagctactcacagctgaagagc
tctcagacacactccaggcacaagaggagcatcgaggaggcgttacccgcggtgtgtaag
actcgtacggtgatctacgagatccctcggagccaggtggatcccacctccgctaacttc
atcatctggcccccctgtgtagaggtgaagagatgtaccggatgctgcaacaccagcaac
atgcactgcctgccctcccgcaagcaccaccgcactgtcaaggtggctaaggtggagtat
gtgaggaggcgtcctaaactgaaggaggtgctggtgcggctggaggagcaccttgagtgt
atatgcacctccaaacgacacatcaaggaactctacgacacagacaatggcgtaaggtga
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