Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423831
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Entry
139423831 CDS
T10872
Name
(RefSeq) suppressor of cytokine signaling 7-like isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139423831
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
139423831
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
139423831
NCBI-ProteinID:
XP_071031569
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Position
13:complement(21873706..21881550)
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AA seq
844 aa
AA seq
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MNNAQDMSPDFVLMRLVSAAEDDRLDEENGNLSSGGVVAGLGKEVLAHSNMKGGLEFSRD
PKTGLAHSGHLSSLNNAQQSCGTAAPDTGVMATRPSVSITLPPQSSMEAKGFEFAHRGGL
RPRLLVFPNILRDGEEILDRESDGRNQSREHIGLDKTSGSVSDISGGINNNTLSAGDTQQ
QNHLSRSWGLHPRVALSTVAADIEGGELCHRHRLITNPLDWHPLSDKSNPLTMIESKWGC
TTGELPNGPVFDLARRFGELGLGAVPKILFKDGEMPQCSCQGAHGPAPAGMGHGDDPTET
SDALLVLEGLGTGDVASLGITGCPEDDSDESRARRVQKMSGAFSLSSFQAELTRQMEGVA
GEPCPSAHGDAQVCSLHGNAPNPTQPSPGDTEQNPEVSKLPGASAATPSSDRPVSPNPSQ
ASTPRKRADKCVSAPRTPNGRGSDGEKTLKVPGKSRKGSLKIRLSKLFRTKSCSGSNTLL
DKRPSVAFSISSAGSLTDMASGSGGEHDVDSQPRMTRAQSAFSPASFAPFTGETVSLVDV
DISRRGANTRHPPTPPPPPRRSLSLLDDIGGPQPGPFLVGVMGASLQSLPLPLPPPHPSH
ATIQHSISLNDAFLRALPHSTSSQLISAPPSSRLAPPPRLCPLRRPEASNFTASLRELEK
CGWYWGPMNWEDAEMKLKGKPDGAFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFS
LWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKS
LQHLCRFCIRQMVRIDHIQELPLPKPLIMYLRKFYYYDAEEEMYLSIKSIRPGAGVEQVA
ESQT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcgcaagatatgtctcccgattttgtcttgatgcgcctggtttccgcggcc
gaggatgaccgcttagacgaggagaatgggaatctgtcgtcgggtggagtggtggcagga
ctcggtaaagaggtcttggctcatagcaacatgaaagggggcttggaattctcccgagat
cccaagacaggcctcgcgcattccgggcatctctcttcgctgaacaatgcacaacagagc
tgcggaacggcggcacctgacaccggggtgatggcaactagaccttcggtgtctattact
cttcctccacagagctctatggaggccaagggctttgagttcgctcacagaggcggctta
cggcctcggctccttgtgtttcctaacatattgagggatggtgaggagattttagaccgt
gaatccgacggtcggaatcagtcgagggaacatattggtttggacaagacctccggctct
gtctccgacataagcggaggcatcaataacaacacgctcagcgccggcgacacgcaacag
cagaaccatctgtcccggagctggggtctgcatccccgggtggcattatccacggttgct
gccgatatcgagggaggtgagctatgtcatcggcaccgtttgatcaccaacccattagac
tggcatcccttatcggataaatccaatcctctcaccatgatagagtcgaaatgggggtgc
acaaccggggaactgcccaacggcccagtgttcgacctggccagaaggttcggggagctg
gggctcggcgcggtacccaagatattattcaaggacggggagatgccccagtgctcgtgt
cagggtgcacatgggccggcacctgcggggatggggcatggggatgacccgactgagact
agcgatgctttgttggtgctggaggggcttgggactggggacgtggccagcctgggtatc
actggctgcccggaggacgattcggatgaaagtcgagcacgtcgagttcaaaagatgtcc
ggtgcattttctctcagtagctttcaagcagagttgaccagacagatggaaggggtggct
ggagaaccttgtccgtcggcgcacggtgacgcacaagtatgtagcctgcatggaaacgca
cctaacccaactcaaccgagcccgggagatacagaacagaatccggaggtgtcgaaatta
cctggggcctctgcggctacaccaagctcggaccgacctgtcagtccaaaccctagccag
gcatcaacaccacggaagcgggcagacaagtgcgtcagtgcgccccggactccaaacggt
cggggaagcgacggagagaaaacactaaaagttccagggaagtccagaaagggttcactt
aaaatacgcctgagtaaacttttcagaactaaaagctgtagtggttccaatacccttctg
gataagaggccatcagtggccttttcaatctcctccgctggaagtctgacggatatggcc
agtggaagtggtggggagcatgacgtggacagccaacccagaatgaccagggcccaaagt
gccttctctcctgcttcctttgctcctttcactggtgagactgtttcattggtggatgtg
gatatttcgaggagaggagcgaacactcggcaccctcccacgcctccacctccaccacgc
agaagtctcagtctattagatgacataggtgggccgcagcctggtcctttcctagtgggt
gttatgggggcctccctacagtccctccccctgcctcttcctcctcctcatccctcccat
gccaccatccagcatagtatcagcctcaatgatgcattcctccgggccctgcctcactct
acctcttcacagctcatctcagctcctccctcttccaggttggccccgcccccaaggctc
tgtcctctgaggcggcctgaggccagcaacttcaccgctagtctgagagagctggaaaag
tgtggctggtattggggtcctatgaactgggaagatgcagagatgaagttgaaggggaag
cctgacggggcgttcctggtgagggacagctctgacccccgctacatcctcagcctcagc
ttccgctcccagggagtcacacaccatacgcgcatggagcactacagagggacattcagc
ttgtggtgtcaccccaagtttgaggaccgatgtcattctgtggtggagtttatcgagcga
gccatcatgcactccaagaatggaaaattcctctacttcctgcgatcacgtgtgccaggg
cttccccctaccccggtgcagctgctctacccagtgtcccggttcagcaacgtcaagtcc
ctgcagcacctctgccgcttctgcatccgacaaatggtccgcatcgaccacatccaggag
ctgccgctgcccaaaccactgatcatgtacctgaggaagttctactactacgatgcagag
gaagagatgtacctgtcaatcaagagcattcgaccaggggctggagtagaacaagtggcc
gagtctcagacgtaa
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