Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423999
Help
Entry
139423999 CDS
T10872
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
ocla04020
Calcium signaling pathway
ocla04148
Efferocytosis
ocla04370
VEGF signaling pathway
ocla04371
Apelin signaling pathway
Module
ocla_M00100
Sphingosine degradation
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
139423999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139423999
NCBI-ProteinID:
XP_071031774
LinkDB
All DBs
Position
13:complement(47409357..47429543)
Genome browser
AA seq
546 aa
AA seq
DB search
MDNDIAEPDPSRQRNGVVEGLYGEFTDSLNAKVRYSVSLTESALTIQKISSSPGQDEVVF
HLADCLGCLAYKVEDEADVGAFFTAYFYPFKRRWISTGMARQKVEQCFRVAMVQDPLTNL
QEAERWARAIREASIRQIPRRHDVKYYELRRPCRVMVLVNPQSGRGQALQLFSGQIEPML
TEASVPYTLVITEHQNHARDLVRETDLSQWDALVILSGDGLLFEVLNGLLEREDWEEAIQ
TPLGILPGGSGNALAASVHHYTKSPPAWGKELLLSCGFLLCKGLVTRLDLVSVHLASSQR
IFSFLSLAWGFVADVDIESEKYRLVGPMRFLVGTLMRLASLKVYQGRLAYLPAPPFTPQN
SSLCSSLPCGPNSSPNQNSRHNHITNSNHNTAHNSSNIANTTMRTEPQPVNQKGPPDSLL
ADLEQPVPDHWTVVNEEDFVLVLAMFQSHLAEDLFAAPGAAADDGFIHLLYVRAGISRLA
LLTLFMTMEKGGHLAIGCPHLVYERVKAFRLEPLSPEGAITVDGEMVEYGPVQAQVHEGI
ARLISG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacatcgccgaacctgacccatcccggcagcgcaatggtgtcgtggaaggg
ctttatggagaattcacggactcgctcaacgcaaaggtcagatattctgtgagtttgact
gagagtgctctcactattcaaaagatctcatcgtcacctggacaggatgaggtggttttc
catttagctgactgtcttggctgcctggcttataaagtggaggacgaagcggatgttggg
gcgttctttacagcctatttctacccgttcaagaggcgatggataagcacaggcatggcc
cggcagaaagtagagcagtgctttcgggtcgcaatggtccaggaccctctcaccaatctt
caagaggcagagagatgggcgcgtgccatcagagaggcttctatccgccagataccccga
cgacatgatgtgaagtattatgagctacggcggccctgcagggtcatggttctggtgaac
ccccagagtgggcggggccaggctctccagcttttctctgggcaaatcgagcccatgctc
accgaggcttcagtcccctacacattggtcatcactgagcaccagaaccatgcgagggac
ctggtgagagagactgatctgtcacagtgggacgctctggtcatcctgtcaggagacggg
ctgctgttcgaggtgttgaatggtcttctggagagagaggactgggaggaggccatccag
accccactgggcatcttaccagggggctcgggcaacgccctggcagcctctgtccaccac
tacactaagtctcccccggcctggggtaaggagctgctgctgagctgtggcttcctgctg
tgtaaaggcctggtgactcggctcgacctggtctctgtccacctggcctccagccagcgc
atcttctccttcctctccctggcctggggcttcgtggccgacgtcgacatcgagagcgag
aagtaccgcctcgttggccccatgcgattcctggtgggtacgctgatgcgcctggcctcc
ctcaaagtatatcaaggtaggctggcatacctgcctgctcctcccttcacaccccagaac
tcctccctctgctcctctctaccctgtgggcccaacagctcccccaatcagaactctcgc
cacaaccacatcacaaactccaaccacaacaccgcccacaactcctccaacattgccaac
acaaccatgaggaccgagccccaaccagtcaaccagaaggggcctcctgactcgctccta
gcagacctggagcagccggtgcctgatcattggacagtagtgaatgaggaagactttgta
ctggtattggccatgttccagtcccacttagctgaggacctgtttgccgcccctggggcc
gcagcagacgacggcttcatccacctgttgtatgtgcgtgcaggcatctccaggctagct
ctgctcacactcttcatgaccatggagaaaggggggcacctggctattggctgcccacac
cttgtgtatgagagggtgaaggcctttcgcctggagcctctgtcccccgagggagcgatc
actgtggacggggagatggtggagtacgggccagtacaggcccaggttcatgaaggaatc
gccaggctcatctcaggctga
DBGET
integrated database retrieval system
