Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424350
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Entry
139424350 CDS
T10872
Name
(RefSeq) poliovirus receptor-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03266
Virion - Herpesvirus
ocla04514
Cell adhesion molecules
ocla04520
Adherens junction
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
139424350
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139424350
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139424350
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139424350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139424350
04090 CD molecules [BR:
ocla04090
]
139424350
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139424350
CD molecules [BR:
ocla04090
]
Proteins
139424350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
ig
V-set
Ig_3
I-set
Ig_2
TM_ErbB1
DUF4342
DUF6338
Motif
Other DBs
NCBI-GeneID:
139424350
NCBI-ProteinID:
XP_071032194
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All DBs
Position
2:21713592..21777824
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AA seq
556 aa
AA seq
DB search
MAREDARNRHDFTKIIGLFSVVTLLTFQAWFVWLRYLPGRFQLRSNQHSGALSQQVKVEP
EVMSYPSQAVNLRCAFADAGGIQLTQVSWIYEPKEGERLNIAVYHPKFGASFPTSPLKGR
VRFTTEPPSLSNPSIQISDVKMTDEGKYICEYATYPSGNEQGVTSLVMLAKPRNSASGVT
VIASTVAAGAKPVVVARCESADGRPAAQIAWVTAVNGNATSASTAGADNTVTVSSQYMLV
PTAADNGKDISCLVSHRTQAKPESFLMKLAIEYPPQVTIVDYDNNWYMGRTNVALTCRAT
ANPIPTTITWKTMSGQMPDTVQVKENVLTVLKVDEQANTTFVCEVKNRLGTGKDQVTVMV
REPSVVPSNAGVVAGAVIGSLLALLLVAALIAVLVTRSRRQQQGYRGNPNHSSYDIKSRV
FGGGKKGSKNGTGAGAGGNGAGGNNSPIYVYKEGSAHDGLTEKANHHVPLHLGRHGEGGV
ATAQDILLSGELDEAERRKFDQLEDDEESYDHFGRGGPILQLRPTHDQDGIMGGYLDDDM
ESQRDGSVISRTAVYV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaggacgctcggaataggcatgacttcacaaaaatcatcggactgttcagc
gtggtcacgttgctgacttttcaagcatggttcgtttggttgcgttacctgccggggagg
tttcagttacgatccaatcaacattcaggggcattgtctcagcaggtgaaggtggaaccg
gaagtgatgtcctaccccagccaggcggtcaacctgaggtgtgccttcgcagacgctgga
gggatacagctcacacaggtgtcctggatctatgagccgaaggagggcgagcggctcaac
atcgccgtgtaccaccctaaatttggggcaagtttccccacatcgcccctgaaggggcgg
gtccgcttcacgacggagcccccctccctcagcaacccctccatccagatctcggacgtc
aagatgactgacgaggggaaatacatctgtgaatacgccacctaccccagcggcaacgaa
cagggtgtcacctccctcgttatgctagccaaacccaggaactctgcctccggggtaaca
gtgatagcctctactgtcgccgcgggagccaagccagttgttgtggcccgctgtgagtcg
gccgatggtcgccctgctgcccagatcgcatgggtgacagctgtcaacggcaacgctacc
tccgcctctacggcgggcgctgacaacaccgtgacggtatccagccagtacatgctggtt
cccacagcagcagacaacggcaaagacatcagctgtttggtgtcccatcgaacccaggcc
aagcctgagagcttcctgatgaaactggccatcgaataccccccacaggtgaccatcgtg
gactatgataataactggtacatgggtcggaccaacgtggctctgacctgtcgggctact
gccaatcccattcctaccaccatcacatggaaaactatgtccggtcagatgccagacaca
gtgcaggtaaaagaaaacgtgctgaccgtgctgaaggtggatgagcaggccaacacaacc
ttcgtctgcgaggtcaagaaccgcttgggcaccggcaaggaccaggtcactgttatggtc
agagaaccctctgtggtcccctccaacgcaggtgtggtggcaggtgctgtgattggctcc
cttctggcccttctcctcgtcgcagcccttattgctgtcctggtcacccggagccgtcgg
caacagcagggttaccgcggcaacccaaaccacagctcctacgacataaagtcgcgcgtc
ttcggtggcggcaagaaggggagcaagaacgggacgggtgctggcgccgggggcaacggg
gcgggcggcaacaacagccccatctacgtctacaaggagggctccgcccatgatggcctg
actgaaaaggccaatcaccacgtgccgctacacctggggaggcatggtgaggggggggtt
gccacggcgcaggacatcctgctgagcggcgagctggacgaggcagagcggagaaagttt
gaccaactggaggatgacgaggagagttacgaccactttggaaggggcgggcccatcctg
cagctccgcccaacacatgaccaggacggaatcatgggcggttaccttgacgacgacatg
gagtctcagcgcgacgggtcggtcatctcacggactgccgtgtacgtgtag
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