Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424434
Help
Entry
139424434 CDS
T10872
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139424434
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139424434
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139424434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139424434
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139424434
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Chemokines
139424434
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Chemokines
139424434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
139424434
NCBI-ProteinID:
XP_071032330
LinkDB
All DBs
Position
13:complement(13640372..13656184)
Genome browser
AA seq
99 aa
AA seq
DB search
MDVKVLAVLALLAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggccctactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctgaacacc
gtcccccagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa
DBGET
integrated database retrieval system
