Afipia carboxidovorans OM4: OCA4_c08790
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Entry
OCA4_c08790 CDS
T01967
Symbol
ileS
Name
(GenBank) isoleucin-tRNA ligase IleS
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCA4_c08790 (ileS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oco01007
]
OCA4_c08790 (ileS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c08790 (ileS)
Enzymes [BR:
oco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
OCA4_c08790 (ileS)
Amino acid related enzymes [BR:
oco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
OCA4_c08790 (ileS)
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OCA4_c08790 (ileS)
Prokaryotic type
Other AARSs
OCA4_c08790 (ileS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
AEI02026
LinkDB
All DBs
Position
complement(937404..940373)
Genome browser
AA seq
989 aa
AA seq
DB search
MTDKPKTDAPDYSKTLYLPQTDFPMRAGLPQREPDLLARWNEIDLYGQLRATSKGRPKFV
LHDGPPYANGNIHIGHALNKILKDLVTRSQQMLGFDSNYVPGWDCHGLPIEWKIEEGYRA
KGKNKDAVPINEFRKECRAFAQKWVDIQREEFKRLGVIGDWAHPYTTMAFAAEAQIAREI
MKFAANGLLYRGSKPVMWSVVEKTALAEAEVEYEDHTSDTVWVKFPVKAAFGRLANASVV
IWTTTPWTLPGNRAISFSSKIAYGLYKITDAPADNWAKTGDLLILADKLAEDVFKQARVT
SYERTSDIDSGILDALECSHPLKGLDGGYEFTVPLLDGDHVTDDTGTGFVHTAPGHGRED
FDIWMHNARELEARGISAAIPYTVDENGALTTQAPGFTGRRVLTDKGEKGDANDTIIKAL
VERGALLARGRLKHQYPHSWRSKKPVIYRNTPQWFIAMDKAIKGEVKKGDTLRHRALQAI
SVTRWVPAQGENRITGMITGRPDWVVSRQRAWGVPITVFARENGDGSVELLRDEAVNTRI
AEAFEKEGADAWYIEGARERFLGNHANEDWQKVDDILDVWFDSGSTHAFVLEDPVHFPGL
AGIERKVDGGRDTVMYLEGSDQHRGWFHSSLLESCGTRGRAPYDVVLTHGFTLDEQGRKM
SKSLGNTTAPQDVIKQSGADILRLWVAQSDYSDDLRIGPEILKGTIETYRKLRNTIRWML
GTLHHLTPNDSVAFADMPELERLMLHRLSEVDATVRRAYAEFDYKNVIAALTNFMNTELS
AFYFDVRKDVLYCDPASSTTRKAALTTVSILCDAIVKWLAPILSFTCEETWLTYRASEAP
SVHLTTFPDGLDKYRNDALATKWESIRAVRSVVTGALEIERAAKRIGSSLEASPLVYVSD
MKLFAILADTDLAEVCITSNAMVTNDDPPADAFRLTEVPGVAVVVEKAVGKKCARSWKIL
PTVGDDPEYPDVTPRDAQALREWKALAKV
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagccgaaaaccgacgcccccgattattccaagacgctctatctgccgcag
acggacttcccgatgcgcgcgggcctgccgcaacgcgagccggacctcttggcgcgctgg
aacgagatcgacctctacggacaactgcgcgcgacctcgaaagggcggccgaaattcgtg
ctgcacgacggcccgccctacgccaacggcaatatccatatcggccacgcgctcaacaag
atcctcaaggacctcgtgacccggagccagcagatgctgggcttcgattccaattacgtg
ccgggctgggactgccacggcctgccgatcgaatggaagatcgaggaaggctaccgcgcc
aagggcaagaacaaggacgcggtgccgatcaacgaattccgcaaggagtgccgggcgttc
gcgcagaaatgggtcgacatccagcgcgaggaattcaagcgtctcggggtgatcggtgac
tgggcgcatccctacaccacgatggcgttcgccgccgaagcacagatcgcgcgcgagatc
atgaagttcgccgccaacggtctgttgtatcgcggctccaagccggtgatgtggagcgtg
gtggagaagaccgcgcttgccgaagcggaagtcgaatacgaggaccacacctccgatacg
gtgtgggtgaagtttccggtgaaggccgcgttcggccgtctcgccaacgcctcggtggtg
atctggaccacgacgccgtggacgctgcccggcaaccgcgccatctcgttctcgtcgaag
atcgcctacggtctctacaagatcaccgacgcgcccgccgacaactgggcgaagaccggc
gaccttctgatcctcgccgacaagcttgccgaagacgtgttcaagcaggcgcgcgtcacg
tcctatgaacgcacctccgacatcgacagcggcattctcgacgcgctcgaatgcagccat
ccgctgaagggattggacggcggctacgaattcaccgtgccgctgctcgatggagatcac
gtcaccgacgataccggcaccggcttcgtccacaccgcgccgggccatggccgcgaggac
ttcgacatctggatgcacaatgcacgcgagctcgaagcgcgcggcatttcggcggcgatc
ccctacacggtcgatgagaacggcgcactgacgacgcaggcgccgggcttcaccggccgc
cgcgtgctcaccgacaagggcgagaaaggcgacgccaacgacaccatcatcaaggcgctg
gtggagcgcggcgcactgctcgcgcgcggccgcctcaagcatcagtatccgcattcgtgg
cgctcgaagaagccggtgatctatcgcaacacgccgcaatggttcatcgcgatggacaag
gccattaagggagaggtgaaaaaaggcgatacgctgcgccatcgcgccttgcaggcgatt
tccgtcacgcgctgggtacccgcgcagggcgagaaccgcatcaccggcatgatcaccggc
cgccccgactgggtggtgtcgcgccagcgcgcctggggcgtgccgatcaccgtgttcgcg
cgcgagaacggcgacggctcggtcgaactgctgcgagacgaggccgtcaacacgcgcatc
gccgaggctttcgaaaaagagggcgccgacgcctggtacatcgagggtgcgcgcgagcgc
ttcctcggcaaccacgccaacgaggactggcagaaggtcgacgacattctcgacgtctgg
ttcgattccggctccacgcacgcgttcgtgctggaagatccggtgcatttcccgggcctt
gccggcatcgagcggaaggtggacggcggccgcgacaccgtgatgtatctcgagggctcg
gaccagcatcgtggctggtttcattcctcgctgctggagagctgcggcacgcgcggacgc
gcgccctacgacgtggtgctgactcacggcttcacgctcgatgagcagggccgcaagatg
tcgaagtcactcggcaacaccaccgcgccgcaggacgtcatcaagcagtccggcgccgac
attctgcggctatgggtcgcccaatcggattattccgacgatctgcggatcgggccggaa
atcctgaaaggcaccatcgagacctatcgcaagctgcgcaacaccatccgctggatgctc
ggcacgctgcatcacctcacgccgaacgacagcgtcgcgttcgccgacatgccggaactg
gagcggctgatgctgcatcgcctcagcgaagtcgatgccacggtgcggcgcgcctatgcc
gaattcgactacaagaacgtgatcgcggcgctcaccaatttcatgaacaccgaactctcg
gcgttctacttcgacgtgcgcaaggacgtgctctattgcgacccggcgtcatcaacgacg
cggaaggccgcgctcaccaccgtgagcattctgtgcgacgccatcgtcaaatggctcgcg
ccgatcctgtccttcacctgcgaggagacctggctcacctatcgcgcgagcgaggcgccg
tcggtgcatctcaccaccttccccgacgggctcgacaaatatcgcaacgatgcactggcc
acgaaatgggagagcatccgcgcggtgcgcagcgtcgtcaccggcgcgctggagatcgaa
cgtgcggccaagcgcatcggctcctcgctcgaggcctcgccgctcgtctatgtctccgac
atgaagctgttcgcgatcctcgccgacaccgatctcgccgaagtgtgcatcacctcgaat
gcgatggtcaccaacgacgatccgcccgcggatgcgttccggctcaccgaggtgccgggt
gtcgccgtggtggtggaaaaggcggtggggaagaagtgcgcgcgctcgtggaagatcctg
cccacagtcggcgacgatccggaatatcccgacgtcacaccccgcgacgcgcaggcgttg
cgcgaatggaaggcgctggcgaaggtctga
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