Afipia carboxidovorans OM4: OCA4_c33100
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Entry
OCA4_c33100 CDS
T01967
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase componentSucA
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00020
Citrate cycle (TCA cycle)
oco00785
Lipoic acid metabolism
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
oco01210
2-Oxocarboxylic acid metabolism
Module
oco_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oco_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCA4_c33100 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OCA4_c33100 (sucA)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
OCA4_c33100 (sucA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
NDUFA12
Motif
Other DBs
NCBI-ProteinID:
AEI04406
LinkDB
All DBs
Position
complement(3491766..3494717)
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AA seq
983 aa
AA seq
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MSRQDANANFALTSFLDGANATYIDEMYSRYDADPSSVDPEWQAFFQSLNDPPADVDKNA
RGPSWEKPHWPLAPTDELTSALDGNWAQIEKVVGDKIAARAAAATPSVSARDIMQATRDS
VRALMLIRAYRMRGHFHANLDPLGIQEQIDHEELDPRSYGFTDDDYDRKIFLDHVLGLEY
GTLREIVAICERTYCQTLGVEFMHISNPEQKAWIQERIEGPDKEISFTREGRRAILMKLV
EAEGFEKFCDLKFTGTKRFGLDGGEALIPALEQIIKRGGNLGVREIVFGMPHRGRLNVLT
QVMGKSHRALFHEFKGGSANPDEVEGSGDVKYHLGASSDREFDNNQVHLSLTANPSHLEI
VDPVVLGKTRAKQDQNGDPADDRISVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGS
VHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVAIEFRQRF
HKPVVIDMFCYRRHGHNEGDEPAFTQPVMYKKIGGHASTLDIYSKRLIADGVVTEGEVEK
AKADWRARLDAELEAGTSYKPNKADWLDGKWTGFKSSEAGVEPGRVMTGVPLEELKAIGK
KITVAPDGFHLHRTVQRFLDNRAKAIESGEGIDWATGEALAICTLLQDGRNVRLSGQDSE
RGTFSQRHSVLFDQEDESRYTPFNHLGGKVGNYEVINSLLSEEAVLAFEYGYSLAEPNAL
TMWEAQFGDFANGAQVVFDQFISSAERKWLRMSGLVCLLPHGYEGQGPEHSSARLERFLQ
MCAEDNIQVANLTTPANYFHVLRRQLKREFRKPLILMTPKSLLRHKRAVSKLDEFGPETS
FHRILRDDAETGGEIKLVDNAKIRRVILCSGKVYYDLYEEREKRGIDDIYLLRIEQLYPV
PLKTLVQVLEPFKGAEFVWCQEEPRNMGAWHFIEPYLEWVLNQIGATGKRPRYAGRAASA
ATATGLMSKHLAQLKALLDEALG
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccaggacgcgaacgccaacttcgcccttacttccttccttgacggcgccaat
gccacctacatcgacgagatgtactcccgctacgacgcggacccgtcctcggtcgacccg
gaatggcaggcatttttccaaagcctgaacgacccgccagccgatgtcgacaagaacgcc
cgcggcccgtcgtgggaaaagccgcattggccgcttgcgccgaccgatgagctgacctcc
gcgctcgacggcaactgggcgcagatcgaaaaggtcgtcggcgacaagatcgcggcgcgt
gctgcggccgcgacgccttcggtcagcgcccgcgacatcatgcaggcgacgcgcgattcg
gtgcgcgcgctgatgctgatccgtgcctaccgcatgcgcggccacttccacgccaatctc
gatccgctcggtattcaggagcagatcgaccatgaggagctcgatccgcgctcctatggc
ttcaccgacgacgattacgatcgcaagatcttcctcgatcacgtgctcggccttgaatac
ggcacgctgcgtgagatcgttgcgatctgcgagcgtacctattgccagacgctcggcgtc
gaattcatgcacatctccaatccggagcagaaggcctggattcaggagcgcatcgagggt
ccggacaaggaaatcagcttcacccgcgagggtcgccgcgcgatcctgatgaagcttgtc
gaagcggaaggcttcgagaaattctgcgacctcaagttcactggcaccaagcgcttcggc
ctcgatggcggcgaagcgctgatccccgcgctcgagcagatcatcaagcgtggcggcaat
ctcggcgtgcgcgagatcgtgttcggcatgccgcatcgcggccgtctcaacgtgctgacc
caggtgatgggcaagtcgcaccgcgcgttgttccacgaattcaagggcggctccgccaac
cccgacgaggtcgagggctcgggtgacgtcaaatatcacctcggtgcctcttccgaccgc
gagttcgacaacaaccaggtgcacctgtcgctgacggcgaacccctcgcatctcgagatc
gtcgatccggtggtgctcggtaaaacccgcgccaagcaggaccagaacggcgatccggcc
gatgaccgcatctcggtgctgccactcttgatgcatggcgacgcggcattcgcaggccag
ggcgtggtggcggaatgcttcgcgctgtccgatctcaagggctatcgcaccggcggttcg
gtgcatttcatcgtcaacaaccagattggtttcaccacctatccgcgttactcgcgctcc
tcgccctatccctccgatgtggcgaagatgatcgatgcgccaatcttccatgtgaacggc
gacgatcccgaggcggtggtgtttgccgccaaggttgcgatcgaattccggcagcgcttc
cacaagcctgttgtgatcgacatgttctgctatcgccgccacggtcacaacgagggcgac
gagcctgcgttcacccagccggtgatgtacaagaagatcggcgggcatgcttcgacgctc
gatatctactccaagcggctgatcgccgatggcgtcgtcaccgaaggcgaagtcgaaaag
gcgaaggccgactggcgcgcgcggctcgatgccgagctcgaagccggcacaagctacaag
ccgaacaaggccgactggctcgacggcaagtggaccggcttcaaatcgtccgaggcgggc
gtcgaaccgggccgggtgatgaccggcgtgccgctcgaagagctgaaggcgatcggcaag
aagatcactgtcgcgcccgatggtttccatctgcaccgcaccgtgcagcgcttcctcgac
aatcgcgccaaggcgatcgagagcggcgagggcatcgactgggcgaccggcgaggcgctt
gcgatctgcacactgctgcaggacggacgtaacgtgcgtctctctggtcaggattcggag
cgcggcaccttctcccagcgccattcggtcctgttcgatcaggaggacgagagccgctat
acgccgttcaaccatctcggcggcaaggtcggcaattacgaggtcatcaactcgctgttg
tccgaagaggccgtgctggcgttcgaatacggctactcgctggccgagccgaacgcgctt
acgatgtgggaggcgcagttcggcgacttcgcgaacggcgcgcaggtggtgttcgaccag
ttcatctcctccgccgagcgcaaatggttgcgtatgtccggcctcgtctgcctgttgccg
catggctatgaggggcaaggaccggagcattcttcggcgcgactggagcgcttcctgcag
atgtgcgcggaagacaacatccaggttgcgaacctcacgacgccggcgaactatttccat
gtgctgcggcgccagctcaagcgcgagttccgcaagccgctgatcctgatgacgccgaag
tcgctgctgcgccataagcgcgcggtttcgaagctcgacgagttcgggccggagacgtcg
ttccaccgcatcctgcgcgacgacgcggagacgggcggcgagatcaagctggtcgataac
gccaagatccgccgcgtcatcctctgctccggcaaggtctattacgacctctacgaggag
cgcgagaagcgcggcatcgacgacatctatctgctgcgcattgagcagctctatccggtg
ccgctgaagacgctggtgcaggtgctcgaacccttcaagggcgccgaattcgtctggtgc
caggaggagccgcgcaacatgggcgcgtggcacttcatcgagccgtatctcgagtgggtg
ctcaaccagatcggcgccaccggcaagcgtccgcgttacgcgggccgtgccgcatcggct
gcgaccgcgacgggcctgatgtcgaagcatctcgcccagttgaaggcgctgctcgacgag
gcgctcggctga
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