Afipia carboxidovorans OM4: OCA4_c33110
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Entry
OCA4_c33110 CDS
T01967
Symbol
mdh
Name
(GenBank) malate dehydrogenase Mdh
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00020
Citrate cycle (TCA cycle)
oco00270
Cysteine and methionine metabolism
oco00620
Pyruvate metabolism
oco00630
Glyoxylate and dicarboxylate metabolism
oco00680
Methane metabolism
oco00710
Carbon fixation by Calvin cycle
oco00720
Other carbon fixation pathways
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
Module
oco_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oco_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
oco_M00012
Glyoxylate cycle
oco_M00168
CAM (Crassulacean acid metabolism), dark
oco_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCA4_c33110 (mdh)
00620 Pyruvate metabolism
OCA4_c33110 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
OCA4_c33110 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
OCA4_c33110 (mdh)
00720 Other carbon fixation pathways
OCA4_c33110 (mdh)
00680 Methane metabolism
OCA4_c33110 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OCA4_c33110 (mdh)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
OCA4_c33110 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
AEI04407
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All DBs
Position
complement(3494987..3495955)
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AA seq
322 aa
AA seq
DB search
MARNKIALIGSGQIGGTLAHLVGLKELGDVVMFDIVEGVPQGKSLDIAQSSPISGFDAVM
KGTNSYEALDGADVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIAKYAPDAFVICIT
NPLDAMVWALQKSSKLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDVSAFVLGGHGDSM
VPLVRYSTVAGIPLPDLVKMGWTSQGRIDEIVNRTRNGGAEIVNLLKTGSAFYAPAASAI
AMAESYLRDKKRVLPCAAYLSGEYGVKDMYVGVPVVIGSKGVERIVEIELSGKDREGFDK
SVVAVQTLVDACKKIAPDLLGK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaacaagattgcgttgatcgggtccggccagattggcggcaccctcgctcac
ctcgtcggcctcaaggagcttggcgacgtcgtgatgttcgacatcgtggagggcgtgccg
cagggcaagtcgctcgacatcgcccagtcctcgccgatcagcggcttcgatgccgtgatg
aagggcacgaattcctacgaggcgctcgatggcgccgatgtctgcatcgtcaccgcaggc
gttccgcgcaagccgggcatgagccgcgacgatcttctcagcatcaatctgaaagtgatg
gagcaggtgggcgccggtatcgccaaatatgcgcccgacgctttcgtgatctgcatcacc
aacccgctggacgcgatggtctgggcgctgcagaagtcctcgaagctgccggcgaagaag
gtggtcggcatggccggcgtgctggattcggcgcgctttcgctacttcctggctgatgaa
ttcaatgtctccgtcgaggacgtgtcggccttcgtgctcggcggccacggcgactccatg
gtcccgctggtgcgttattccacggtggccggtattccgctgccggacctcgtgaagatg
ggctggacctcgcagggccgcatcgacgagatcgtcaaccgcacccgcaacggcggcgcg
gagatcgtcaacctgctcaagaccggctcggccttctatgcacccgccgcatccgcgatc
gcgatggcggaaagctatctgcgcgacaaaaagcgcgtgctgccgtgcgcggcgtatctc
tccggcgaatacggcgtgaaggatatgtatgtcggcgtgccggtggtgatcggctccaag
ggcgtcgagcgcatcgtcgagatcgaactctcgggcaaggatcgcgaaggcttcgacaaa
tccgtcgtcgcggtgcagacgcttgtcgatgcgtgcaagaaaatcgcgcccgatcttctt
ggaaaataa
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