KEGG   Afipia carboxidovorans OM4: OCA4_pOC167B01110
Entry
OCA4_pOC167B01110 CDS       T01967                                 
Symbol
virD4
Name
(GenBank) type IV secretion protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:oco00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    OCA4_pOC167B01110 (virD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oco02044]
    OCA4_pOC167B01110 (virD4)
Enzymes [BR:oco01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     OCA4_pOC167B01110 (virD4)
Secretion system [BR:oco02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   OCA4_pOC167B01110 (virD4)
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DUF4244
Other DBs
NCBI-ProteinID: AEI04678
LinkDB
Position
pOC167B:complement(106909..109065)
AA seq 718 aa
MARVVAYRIGVAILLLLAFWLLWSMAYEIVVALRWAPGRFPSEGTTRWALFRMQNADRSA
DFFVIAWRHFYNRLLFPGTQLEALIRAGYAAATVGAIGLAGALFAVINRRQMPYGAARFG
TLMEAAKQGLTAKRGIVLGTLSGATLRSDEPAHILVVGPSRSGKGTGFVLPNGYLWQGSA
VFFDPKRENFEALAEHRAAMGNKVFMFSPGSNDTHRYNPLDFVRRDERMATDCLVVASFV
IPEKADDTWAGAGRLLLSALIGYVLASPLIAGAQHMRTVARMTTTGKDISSVLRAIVKTE
RQHLPAWVVDSFNQYIALEPETRNSAVFNVNMAMSLWNNGLISAATETSDFDIRELRRRP
MTIFIGCTIAELSIFRPLIRILFQQIHDLMMVKIPGDDEPHQVLLMLDEFYHVGRMDSLI
SKITISAGYGFRMAIVMQDIAQLDELYGRNTRITTVSGSQIKLFIQINDLETSDFVSEML
GETTQVYKTPIQRPGQGIFAPRVWAPHYTPRPLRSPLELREMSARLSILMVKNSRSFELT
KIRHYLDKPYRAYYERAKGSSPALPKLRTWQDEALRGAINPAPDTPQEPATTASPSTAPP
PPTSAPARKVTTSRRSAKSTTTKAKTSEPLREFAPLTLSSPRPTPPTPPRKALSLGATPP
VPPGESCDVRDILASAAAGQDEHFTAMVSVLRSTPDTKVQQSIEMLRSLHQIFGDDEQ
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcgcgcgtcgtcgcctataggatcggcgtcgcgatcctgctgctgctcgccttctgg
ctgctgtggagcatggcctatgagattgtcgttgccctgcgctgggcgccgggccgcttc
ccgagtgagggcaccacccgctgggcgctgttccggatgcagaacgccgatcgctccgcc
gacttctttgtgatcgcctggcgtcatttctacaaccgactcctgttcccaggcacccaa
ctcgaggcactgatccgcgccggctatgcggcggccactgttggcgcgatcggactcgcg
ggggcgctgttcgcggtcatcaatcgccgccagatgccgtatggcgccgcccgcttcggc
acgctgatggaggcggccaagcagggcctgaccgccaagcgcgggatcgtgctgggaacg
ctgagcggcgccacgctccgctcggacgagcccgcacatatcctggtcgtcggaccatca
cgctccggcaagggcaccggcttcgtcctcccgaatggctatctttggcagggttcggcc
gtgttcttcgatccgaagcgcgaaaacttcgaagcgcttgcggaacatcgcgccgcgatg
ggcaacaaggtttttatgttctcgccgggatccaacgacacgcatcgatacaatccgctc
gatttcgtacggcgcgacgagcgcatggcgaccgactgcctggtcgtcgcctcctttgtg
attcctgaaaaagccgacgacacctgggccggagccggccgtcttctgctctcggcgtta
atcggctacgtgctggcttcaccgttgatcgcgggcgcacagcacatgcgcacggtggcc
cggatgacgacgaccggcaaggatatctcctcggtgctgcgtgcgatcgtgaagactgaa
cgacagcacttgccggcatgggtggtcgacagcttcaaccagtacatcgcgttggagccc
gagacccgcaacagcgccgtgttcaacgtcaatatggcgatgtcgctgtggaacaacggc
ctcatctcggccgcgaccgagacatccgatttcgacattcgcgagctacggcgccgtccg
atgacgattttcatcggctgtaccatcgccgaactgtcgatcttccggccgctaatccgc
atcctgtttcagcagatccacgatctgatgatggtgaagattccgggtgacgacgagccg
catcaggtgctgctcatgctcgacgaattctaccatgtcggccgaatggactctttgatc
tcgaagatcacgatcagcgcgggatatggcttccggatggcgatcgtgatgcaggacatt
gcgcagctcgacgaactctacggcaggaacacgcgcatcaccacggtctcgggctcgcag
atcaagctgttcatccagatcaacgatctcgaaacctcggactttgtgtccgagatgctc
ggcgaaacgacacaagtctataaaacgccgatccagcgtccaggacagggcattttcgcg
ccgcgcgtctgggcacctcactatacaccgcgcccgctgcgcagcccgctcgaactccgc
gagatgtcggcccggctgtcaatcctgatggtcaagaactcccgctcgttcgaattgacc
aaaatccggcactacttagataaaccctatcgcgcgtattacgaacgggcaaagggctct
tcgccggcgctgcccaaactgcgcacctggcaagatgaggcgctgcgcggggcaatcaat
ccggcgcctgacacgccccaagaaccggccacgaccgcaagcccgtcgacagcgccaccg
ccacccacatcggcgccggctcgcaaggtgaccacatcccgtcgaagcgcgaaaagcaca
acaaccaaagcgaagacctccgaaccgctgcgagaatttgcccctctcactctctcttcg
ccgcgtccaacaccgccaaccccgccgcgcaaggcgctgtcgctcggcgcaacgcctccc
gttcctccgggagaaagctgcgacgtgcgggacattctcgcatctgccgctgcaggacag
gacgaacatttcaccgcaatggtgagtgtgttgcgttcaacaccagacacgaaggtccag
caaagtatcgagatgcttaggtctttacaccaaatctttggcgacgacgaacagtga

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