Ochrobactrum sp. MT180101: HGK82_00235
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Entry
HGK82_00235 CDS
T07147
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGK82_00235 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_00235 (nth)
Enzymes [BR:
ocr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HGK82_00235 (nth)
DNA repair and recombination proteins [BR:
ocr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HGK82_00235 (nth)
Prokaryotic type
HGK82_00235 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Cas_Csy3
Motif
Other DBs
NCBI-ProteinID:
QOD63736
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All DBs
Position
1:53292..54041
Genome browser
AA seq
249 aa
AA seq
DB search
MEKAKIKSPVNVSAATRPQRRVRGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLV
AVVLSAQATDAGVNKATRGLFAIADTPQKMLALGEEKVGDHIRTIGLWRNKAKNVILLSE
ALIRDHDGEVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGK
TPEAVEAILVRVIPAEYMLHAHHWLILHGRYVCKARKPECEKCVIADICKYPAKTCDIPA
PLIPLPPQA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggccaaaatcaaatcgcctgtgaacgtttctgccgccacccgccctcaacgt
cgggtgcgtggtacgctttatacggccgatgaaatccatgagatatttcgccgtttctcc
attcagagaccggagccgaagggcgagcttgagcatgtgaatgcctttacgcttcttgtc
gccgtggttttgtcggcacaggccaccgatgccggggtcaacaaggcgacgcgcgggctc
ttcgcaattgccgatacgccgcagaaaatgctggcgctgggcgaagagaaagtcggcgac
cacattcgcaccattggtctttggcggaacaaggcaaagaacgtcattctcctgtccgaa
gccttgatccgcgatcatgacggagaagtgccgggggaccgggacgaactggtaaagctg
ccgggtgttggccgcaagacggccaatgtggtgctgaatatggctttcggccagccgaca
atggcggtggacacgcatatcctgcgcatcggcaatcggattggtcttgctccgggaaaa
accccagaggccgtggaagccatcctcgtccgggtcatccccgcagaatacatgcttcat
gcgcatcactggctgatcttgcatgggcgttacgtgtgcaaggcgcgcaagccggaatgc
gagaaatgtgtgattgccgatatctgcaaatatccggcgaaaacctgcgacattcctgcg
ccgcttatccccttgccgccgcaggcgtga
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