Ochrobactrum sp. MT180101: HGK82_03960
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Entry
HGK82_03960 CDS
T07147
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr01501
beta-Lactam resistance
ocr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HGK82_03960
01503 Cationic antimicrobial peptide (CAMP) resistance
HGK82_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocr03036
]
HGK82_03960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocr02000
]
HGK82_03960
01504 Antimicrobial resistance genes [BR:
ocr01504
]
HGK82_03960
Chromosome and associated proteins [BR:
ocr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HGK82_03960
Transporters [BR:
ocr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HGK82_03960
Antimicrobial resistance genes [BR:
ocr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HGK82_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QOD64407
LinkDB
All DBs
Position
1:824767..825918
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AA seq
383 aa
AA seq
DB search
MKKTLVRRSLNAAFVAVLSPLLLQPSLAQQAPTGAAPPVIVRQVELAPATAPLRFNGQVE
AIEAVDIQARITGFLKEKAFEQGAAVKAGDLLFEIEPDQMQAAVMSAEAQVARAEAAQNA
ARQSLSRTRTLANRNTASQASLDDAQAAFDIATADVRNAEAALNNARLNLSYTQVRSPIN
GTIGRSLFTVGNLVGPGMGPLARIVQLDPVRVVFSITDRALIAIRQKEAGGGTVNPESFK
LTLMLANGTQYGERGNIQFIDNEVSAQTGTVAVRALFANPNHILVPGQVVAVNLLDETVG
ELPIVPMSSVLQDRQGKYVYVLNEGNTVSRRAIVTGTRIDNGWSVTDGLKAGETIVVEGL
QRIADGQAVSPRDPISGTAGVGQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaagactctcgttcgtcgttctttgaacgctgcctttgtagccgtgttgtcgcct
ttgcttctgcagccaagtctggctcagcaagctccaactggcgcagcgcctcccgtgatc
gtgcgccaggtggaactggcacctgcgaccgcaccgcttcgtttcaacgggcaggtcgag
gcgattgaagctgttgatattcaggcgcggatcaccggtttcctgaaggaaaaggcgttc
gagcagggggctgcggtcaaggcaggcgatctcctctttgaaattgagccggaccagatg
caggcggcagttatgtctgctgaggcacaggttgcacgtgccgaagccgcccagaatgct
gcccggcaatcattgtcgcgaacgcggacgctcgccaaccgtaacaccgcttcgcaagct
tccctcgacgatgcacaggcagcgtttgatatcgcgactgcggatgtgcggaacgcagaa
gccgcgcttaacaatgcgcggctcaatctctcctatacgcaggtcagatcaccaatcaac
gggacaatagggcgctcgctctttaccgtcggcaacctcgttggcccgggcatgggaccg
ctcgcgcgcattgtgcagcttgatcccgtgcgtgttgtgttttcgatcacggaccgcgct
ctgattgctattcgccagaaggaagcaggaggcgggacggtcaatcccgaaagcttcaag
ctgactttgatgctggccaacggtacgcaatatggcgagcggggaaacatccagttcatc
gacaatgaagtgagcgcgcagaccggcacagtggcggtgcgcgccctgttcgccaatccc
aaccatattctggttccggggcaggtggttgccgtcaatctgctggatgaaacggttggt
gagttgccgatagttcccatgtcttccgtgttgcaggaccggcagggcaaatatgtctat
gttctcaacgagggtaatacggtttcccggcgtgcgatcgtgaccggcacgcgtatcgac
aatggctggtcggttacagatggcctcaaggctggtgaaacgattgtcgtcgagggcttg
caacgcatcgccgatgggcaggccgtatccccgcgtgacccgatctccggtactgcaggg
gtggggcaatga
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