KEGG   Oryctolagus cuniculus (rabbit): 100009152
Entry
100009152         CDS       T03373                                 
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 precursor
  KO
K06454  T-cell surface glycoprotein CD4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03250  Viral life cycle - HIV-1
ocu03260  Virion - Human immunodeficiency virus
ocu04060  Cytokine-cytokine receptor interaction
ocu04514  Cell adhesion molecules
ocu04612  Antigen processing and presentation
ocu04640  Hematopoietic cell lineage
ocu04658  Th1 and Th2 cell differentiation
ocu04659  Th17 cell differentiation
ocu04660  T cell receptor signaling pathway
ocu05135  Yersinia infection
ocu05166  Human T-cell leukemia virus 1 infection
ocu05170  Human immunodeficiency virus 1 infection
ocu05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
ocu05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100009152 (CD4)
   03260 Virion - Human immunodeficiency virus
    100009152 (CD4)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100009152 (CD4)
   04612 Antigen processing and presentation
    100009152 (CD4)
   04660 T cell receptor signaling pathway
    100009152 (CD4)
   04658 Th1 and Th2 cell differentiation
    100009152 (CD4)
   04659 Th17 cell differentiation
    100009152 (CD4)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100009152 (CD4)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100009152 (CD4)
   05170 Human immunodeficiency virus 1 infection
    100009152 (CD4)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    100009152 (CD4)
  09163 Immune disease
   05340 Primary immunodeficiency
    100009152 (CD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ocu04090]
    100009152 (CD4)
CD molecules [BR:ocu04090]
 Proteins
  100009152 (CD4)
SSDB
Motif
Pfam: CD4-extracel C2-set Tcell_CD4_C ig V-set Ig_3 Ig_2 I-set Receptor_2B4 Izumo-Ig V-set_CD47 Ig_6
Other DBs
NCBI-GeneID: 100009152
NCBI-ProteinID: NP_001075782
Ensembl: ENSOCUG00000012911
UniProt: P46630
LinkDB
Position
8:complement(78804377..78828213)
AA seq 459 aa
MNRRIYFQCLLLVLPLALLPAATWGKTVVRGKAGAIVELPCQSSQKRNSVFNWKHANQVK
ILGNQGSSSSSFWLKGNSPLSNRVESKKNMWDQGSFPLVIKDLRMDDSGTYICEVGDKKM
EVELLVFRLTANPNTRLLHGQSLTLTLEGPSVGSPSVQWKSPENKIIETGPTCSMPKLRL
QDSGTWSCHLSFQDQNKLELDIKIIVLGFPKASATVYKKEGEQVEFSFPLNFEDESLSGE
LMWQVDGASSAQSWVSFSLEDRKVSVQKILPDLKIQMSKGLPLSLTLPQALHRYAGSGNL
SLTLDKGKLHQQVSLVMLKVTQVKNKLTCEVLGPIDPKMKLSLKLEDQEAKVSTQKMVQV
LDPKAGTWQCLLSSGDQVLLESKADVLATGLSHQQPTLLAGALGGTAGLVLFAGLCIYCC
VKCRHRRHQAQRMSQIKKLLSEKKTCQCPHRLQKTYNLL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaaccggagaatctacttccagtgcctgctgctggtgctgccgctggcactactccca
gcggccacctgggggaagaccgtggtgagaggcaaagccggagccatcgtggagctgccc
tgccagagttcccagaagaggaactcagtcttcaactggaaacatgcgaaccaggtcaag
atcctgggaaaccagggctcctcctcctcctccttctggcttaaagggaactccccgctg
agcaatcgcgttgaatccaaaaaaaacatgtgggaccaaggatctttccccctggtcatc
aaggatctcaggatggacgactcggggacttatatctgcgaagtgggggacaagaagatg
gaggtggaactgctggtgttcagattgactgccaacccgaacacccgcctgctacatgga
cagtcactgaccctcaccttggaaggcccctctgtggggagcccctccgtgcaatggaag
agtccagaaaataaaatcatagaaaccgggccgacttgctccatgcccaagctgaggctc
caggacagtggcacctggtcctgccacctgtcgttccaggaccagaacaaactggagtta
gacataaaaatcatagtgttgggctttccaaaagcctcggccacagtctacaagaaagag
ggggagcaggtggagttctctttcccgcttaacttcgaagacgaaagcctgagcggagag
ctcatgtggcaggtcgacggggcttcctcggcccagtcctgggtcagcttctccttggag
gacaggaaggtgtctgtgcagaagatcctccctgacctcaagatccagatgagcaagggg
ctcccgctcagcctcaccctgccccaggccctgcatcgctatgctggttccggaaacctg
agcctgacccttgataagggaaagttgcatcagcaagtgagcctggtgatgctgaaagtg
actcaggtaaagaacaagttgacttgtgaggtgctgggacccattgaccccaagatgaag
ctgagcttgaagctggaggaccaggaagcaaaggtctccacccagaagatggtgcaggtg
ctggaccccaaggcagggacctggcagtgtctgctgagcagtggggaccaggtgctgctg
gagtccaaggctgatgttttagccacgggactcagccaccagcagcccacactcctggct
ggcgcactggggggtaccgcgggccttgtactcttcgctgggctctgcatctactgctgt
gtcaagtgccggcaccgacggcatcaggcacagcggatgtctcagatcaagaagctgctc
agtgagaagaagacctgccagtgtccccaccggctgcagaagacttacaatctcctgtga

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