Oryctolagus cuniculus (rabbit): 100009574
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Entry
100009574 CDS
T03373
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04360
Axon guidance
ocu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100009574 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
100009574 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100009574 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100009574 (TRPC5)
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100009574 (TRPC5)
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100009574 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
100009574
NCBI-ProteinID:
NP_001076248
Ensembl:
ENSOCUG00000009245
UniProt:
O62852
LinkDB
All DBs
Position
X:complement(60227194..60550449)
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKQPRRSLSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRASGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVRGAAQSSECPLTCSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactctactacaaaaaagtcaactactcaccataccgagaccgtatccccctg
cagatcgtgagggctgagacagagctctctgcagaggagaaggccttcctcaatgccgtg
gagaagggggactatgccactgtgaagcaggccctacaggaggccgaaatctactacaat
gtcaacatcaactgcatggaccctttaggccgaagtgctctgctgattgccattgagaat
gagaacttggagatcatggaactgctgctgaaccacagtgtgtacgtgggtgatgcgttg
ctctatgccatccgcaaagaagtagtgggtgctgtggagcttctgctcagctacaggaag
ccaagcggagagaaacaggtgcccactctgatgatggatacccagttctctgagttcaca
ccagacatcactcctattatgctggctgcccacaccaacaactatgaaatcatcaaattg
cttgtccagaaacgagtcacaatcccacggccccaccagatacgctgcaactgtgtggag
tgtgtatccagttctgaagtagacagtctgcgccattctcgctcccgactgaatatctac
aaggctctcgcaagcccctcactcattgccttatcaagcgaggaccccatcctaactgcc
ttccgcctgggctgggagctcaaggagctcagtaaagtggagaatgagttcaaggctgag
tatgaggaactctcccagcagtgcaagctgtttgccaaagacctgctggaccaagcccgg
agctcccgggaactggagatcatcctcaaccacagagatgaccacagtgaagagcttgat
cctcagaagtaccatgatctggctaagctgaaggtggccatcaaataccaccagaaagag
tttgttgctcaacccaactgccaacagttacttgccactctgtggtacgacggcttccct
ggatggcggaggaaacactgggtagtcaagcttctgacctgcatgacaattgggttcctg
tttcccatgctgtctatagcctatctgatctcacccagaagcaacctggggctgttcatc
aagaaaccctttatcaagttcatctgccacacagcatcctatttgaccttcctcttcatg
cttctcctggcttctcagcacatcgtcaggacagacctccatgtgcagggacctccccca
actgtcgtggaatggatgatattgccctgggttctaggttttatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactccctctacttagcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcggccaagggaggaatgggaaatgtggcacccgactctgattgcagaagca
ctcttcgcaatatccaacattttgagttcattgcgtctcatatccctgttcacagccaac
tctcatttagggcctctgcagatctctttgggacgcatgctgcttgatatcctcaaattc
ctctttatctactgcctggtactgctggcctttgccaatggactgaaccagctttacttt
tattatgagaccagagctatcgatgagcctaacaactgcaaagggatccgatgtgagaaa
cagaacaatgccttctccacgctcttcgaaaccctgcagtcactcttctggtctgtattc
ggccttttaaacctttacgtcaccaatgtgaaagccagacacgagttcactgaatttgtg
ggagctaccatgtttggaacatacaatgtcatctccctggtggtgctgctgaacatgctg
attgcaatgatgaacaattcctaccagcttattgccgatcatgctgatattgagtggaaa
tttgcaaggacaaagctctggatgagttactttgatgaaggtggtaccttgccacctcct
ttcaacatcatccccagccccaagtcatttctataccttggcaactggttcaacaacact
ttctgccccaaaagagaccctgatggtagacggagaaggcacaacttgagaagtttcaca
gaacgccatgctgacagtctgatacaaaatcagcattatcaggaagttatcaggaattta
gttaaaagatatgtggctgcaatgataagaaattccaaaacaaatgaaggactaacagaa
gaaaatttcaaggaactaaagcaggacatctccagctttcgatacgaagtgcttgacctc
ttaggaaatagaaaacagccaaggagaagcctttccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtttctttc
aatttaggctgtaagaaaaaggcatgccatgggccacctctcatcagaaccatgccaaga
gccagtggtgcccaaggaaagtcaaaagccgagtcatcaagcaaacgctccttcatgggc
ccttctctcaagaaattgggtctcctattctccaagtttaatggtcatatgtctgaaccc
agttcagaaccaatgtacaccatttctgatggaatcgttcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggagaagtccggggcgctgctcagagcagtgaatgccct
ttaacctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactc
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgatggacaggaagaacaagttactactcggctctaa
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