Oryctolagus cuniculus (rabbit): 100338186
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Entry
100338186 CDS
T03373
Name
(RefSeq) BLOC-3 complex member HPS4
KO
K20194
Hermansky-Pudlak syndrome 4 protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100338186
Membrane trafficking [BR:
ocu04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
100338186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Motif
Other DBs
NCBI-GeneID:
100338186
NCBI-ProteinID:
XP_002721217
Ensembl:
ENSOCUG00000006284
UniProt:
G1SQP2
LinkDB
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Position
21:complement(95998..121048)
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AA seq
678 aa
AA seq
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MAAAPAAETKANSWWNYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGV
VRCVSDISGSPPALVRLRKLKFAVKVDGDHLWVLGCAVELPDVSCQRFLDQLIGFFHFSN
GPVALAYQNCSRDELSVAWDSFIEQILHNTGDLHKIFNSLWNLDRTKVEPLLLLKAALIL
QTCQRAPHILAGCILHKGLVVSTQLPPSITAKVLLQSAAPQEQRLPAARDAPPASGAALP
ANVRIIPVFLTGEEAASLREFPVERSTGPPAPPARLRDGSAQRPPQPDSTSPGCVESVAW
PLATTLRPPSADEARPDVQGENGHPWNLGPAGLHGTARGRGPGLSCSPEKELDLSEIHIP
GAQETGTAAGHFAIAPVCAPDSGVPRPQESVSKPGDLAPTPPEDAAAGRFSPPSPPEALT
LNGALEQREDRPGDSGPLPRRSSWPSSLPCPESRRRGSAPPGRERGWDGALDGTHERPPT
PGLQCESGPGPAADIDSGLPPAGPCVGLVRMNLYTHSVKGLVLSLLAEEPLLADGAAIEE
VYHSSLASLNGLEVHLQETLPADKAGPASSTYNFTHYDRIQNMLTANLPQVATAQDRRFL
QAVSLMHSDFAQLPALYEMTVRNASTAVYACCNPAQETYFQQLASAAPSSGFPNPQDGAF
SLSGKAKQKLLRHGVNLL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccccggccgcggagacaaaggcgaactcctggtggaattacttttttctt
tacgatggttccaaggtgaaggaagaaggcgatccgacgagagcgggcatctgttacttc
tatccctcgcagaccctgctcgaccagcaggagttgctctgcgggcagattgccggcgtc
gtccgctgcgtctccgacatttctggctctcctccggccctcgttcgtctgcggaagctg
aagtttgccgtgaaggttgacggggatcacctctgggtgctgggctgtgccgtggagctc
ccggatgtcagctgccagcggtttctggatcagctcattggattctttcacttttccaat
ggccccgttgccctggcttaccagaactgctctcgggacgagctgagcgtggcctgggat
tccttcatcgagcagatcctgcacaacaccggtgacctgcacaagatcttcaattccctc
tggaacttggaccgaaccaaagtggagcccctgctgttgctgaaggcagcgctcatcctg
cagacctgccagcgcgcacctcacatcctggctggctgcatcctccataaaggactggtc
gtcagcacccagctgccgccctccatcactgccaaggtcctgctgcagagcgccgcaccc
caggaacagagacttcctgcagcgagggacgccccgccggcatcaggagcagcgctgccc
gccaacgtccgcatcatccctgtgttcctgaccggagaggaagccgcgagtctccgtgag
ttcccagtagagcggagcactggccctcctgcacctccagccaggctccgggacggctca
gcccagcgccctccccagcccgacagcacatctcctgggtgcgtggaatccgtggcctgg
ccactggccaccacgctgcggcccccgtccgctgatgaagctcggccagacgtccagggg
gagaacgggcacccatggaacctggggcctgcgggactgcacggcactgcccggggccgg
gggcccggcctcagctgctccccggagaaggaactggacttgtctgaaatccacattcca
ggggctcaggaaacagggactgccgcgggtcactttgccatcgcccctgtgtgtgcccca
gacagcggagtgcctcgtccccaggaatccgtcagcaagcccggtgacctggcgcccacg
ccgcccgaggacgcagctgccggccgcttttcccccccctcccctcctgaggcgctcacc
ctgaacggagccttggagcagcgtgaggaccgcccaggcgacagtggccctctccccagg
aggagcagctggccctcatctctgccctgcccagaaagcaggcggagaggaagtgcgcct
cctgggagggaacgaggctgggatggggccctggacggcacccacgagcgcccccccacg
cctggtctgcagtgcgagtcaggcccaggccccgccgccgatatcgactccggcctgccc
ccagcagggccctgcgtgggactcgtgcggatgaacctgtacacgcacagcgtgaaagga
ctggtgctgtccctgctggccgaggagccgctgctggccgacggtgcggccatcgaggag
gtgtaccacagcagcctggcgtcgctgaacgggctggaggtgcacctgcaggagacgctg
cccgcggacaaagctggccccgccagcagcacctacaacttcacgcactacgaccgcatc
cagaacatgctgacagcgaacctgccgcaggtggccaccgcccaggaccgccgcttcctc
caggccgtcagcctgatgcactccgacttcgcccagctgcctgcgctgtacgagatgact
gtcaggaacgcctccacagcggtgtacgcctgctgcaaccccgcccaggagacctacttc
cagcaactggcgtccgccgcgcccagctcgggcttccccaacccccaggacggcgccttc
agcctctccggcaaagccaagcagaagctgctgcggcacggggtgaacctgctctga
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