Oryctolagus cuniculus (rabbit): 100338936
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Entry
100338936 CDS
T03373
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04140
Autophagy - animal
ocu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100338936
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100338936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100338936
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100338936
Membrane trafficking [BR:
ocu04131
]
SNARE
SNARE associated proteins
Others
100338936
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
100338936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
OapC
Motif
Other DBs
NCBI-GeneID:
100338936
NCBI-ProteinID:
XP_002719485
Ensembl:
ENSOCUG00000008555
LinkDB
All DBs
Position
19:42439706..42491398
Genome browser
AA seq
1116 aa
AA seq
DB search
MASGAAGAVSCCRWPGERIVDLGLRGACGRECPQLLCPLLWVPCDSPRELLCVEMLSVGE
NGLDPRAAIPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDANTMCSALEAVFIHGLHAKH
IRAEAGGKRKKSAHQKPLPQPVFWSLLKTVTHKHIISELEHLVFVNTDVGRCRAWLRLAL
NDGLMECYLKLLLQEQTRLCEYYQPSALLRDAEEAEFLLSFLQGLTSLSFELSYKSAILN
EWTLTPLALSGLCPLSELEPVTTSGAELQRKESLDSISHSSGSEDIEVQHSGHKVRRNRK
LTASSLSLDTASSSQLSCSLNSDSCLLQEHGSKSPDHAEEPMSYDSDLGTANADDSDRSL
QEVLSEFSKAQVNSVPTRGPSQEPEIPALQASPFLHGLATSAHLHFDVPAEPPPAAASSE
TQDGAHKQEPLSQAPGTLDLPQLGTAQAAPAGSTSSKHPACPVKGTPRAGSQGSGQQKAL
EDDGAGLKLTAASPTSPKGKSWISEDDFYRPPQEPPVESAHSLVPSRGAPETRAALHRHF
SQGPRKSSSLGALDKVCTPSPGARRAKAAPVQEPRNFRVVHRRQMGLSNPFRGLMKLGTV
ERRGAMGIWKELFCELSPLEFRLYLSDEERTCVESCSLLRCESVGPAHSDGRFELVFSGK
KLALRASSQDEAEDWLDRVREALQKVRPQQEDEWVNIQYPEQPEDPPESPQGSHPSHSEL
LPESTALQGTHFNWSSAQVPEPDAIKESLLYLYTDRTWVPYIFSLSLESLKCFRVRNEEK
MLSDSHGVETIRDVLPDTSLGGPAFFKIITAKAVLKLQAGNAEEAALWRDLVRKVLASYL
ETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPTEKGLDSQGCFCAGCSRQIGF
SFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPVCRQALKFLMQIRAQPLIN
LQLVNASLYEHVERMHLIGRSREQLKLLGDYLGLCRSGALKELSKRLSHRNYLLESPHKF
SVADLQQIAEGGYEGFLQALIEFASQHVYHCDLCTQRGFICQICHHHDIIFPFEFDTTVR
CTECKTVFHQSCQDVVKKGCPRCARRRKYQEQSALA
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggcgccgcgggcgccgtttcctgttgtcggtggcccggagagcgcatcgtc
gacttggggctgaggggcgcctgcggccgagaatgcccccagctcctctgcccgctcctc
tgggtgccatgtgactctccgcgggagctgctgtgcgtggagatgctctcagtaggggag
aatggactggatccccgggctgccatcccggtcatcaagaagaagctggtgggatccgtg
aaggcgctgcagaagcagtacgtgtctctggacaccgtggtcaccagtgaggacggagac
gccaacaccatgtgcagtgccctggaggctgtgttcatacacggcctacatgccaagcac
atccgtgctgaggctggaggaaaaaggaagaaaagtgcccaccagaagcctctgccgcag
ccggtcttctggtcccttttgaaaactgtcacccacaaacacatcatctcggaattggag
cacctggtctttgtgaacacggacgtgggccgctgccgggcctggctgcggctggccctc
aatgacggcctgatggagtgctacctgaagctgctgctccaggagcagacccggctatgc
gagtactatcagccctcagccctgctccgagatgccgaggaggctgagttcctccttagc
ttcctgcaaggattaacatccttatcctttgaactctcctacaagtccgccatcttaaac
gagtggacgctcaccccattggccctgtctgggctatgcccactctctgagcttgaacct
gtcactacctctggtgcagaactacagcggaaggagtctctggattcaatttctcactcc
tcaggctcagaggacatcgaagtccagcattcgggccacaaggtccggcggaacagaaag
ctcactgcctcctccctcagcctggacacggccagttcctcccagctgtcctgcagccta
aactctgatagctgcctactccaagagcatggctctaagagtccggaccatgctgaagag
cccatgtcctacgactcagacctgggcacagcaaatgctgacgactcagaccggtctctg
caagaggtgttgtcggaattcagcaaagcccaggtaaactctgtgccaaccaggggaccg
agccaagaaccagagatccccgcactccaggcctcgcccttcctccacggcctcgccacc
agcgcacacctgcactttgatgtgcctgcggagccccctcctgctgcagcatcctctgag
acccaagatggtgcccacaagcaggagccgctttcccaggcacctggcaccctggacctg
ccacagctgggcactgctcaggctgcccctgcagggagcacttcaagcaagcatcctgct
tgtcctgtgaaagggacacccagagcaggcagccaagggagtggccagcagaaggctctg
gaggatgatggagctggactgaagctgacggctgcttctcctaccagtccgaaaggcaag
agctggatctcagaagatgacttctaccggcctccccaggagccaccagtagagagtgct
cactccctggtgccctccagaggggctccagaaaccagggccgctctccacaggcatttt
tctcaaggaccaagaaaaagctcctccctgggggcactagacaaagtgtgcacgccttcc
ccaggggccaggagagccaaggcagccccagtgcaggagcccaggaacttccgggtggtg
caccggaggcagatggggctgtccaacccattccgcggcctcatgaagctgggcaccgtg
gagcgccggggggccatgggcatctggaaggagctcttctgcgagctctccccgctggag
ttccgcctctacctgagcgacgaggagcgcacctgcgtggagagctgctccctgctgcgc
tgcgagtctgtggggccggcccacagcgatgggcgcttcgagctggtcttctctggcaag
aagctggccctgcgtgcctcctcacaggatgaggctgaggactggctggaccgcgtgcgg
gaggccctgcagaaggtccggcctcagcaggaggacgagtgggtgaacatccagtaccca
gagcagcctgaggaccctcctgagtccccccagggcagccacccctcccactcagagcta
ctcccagagtctacagccctgcagggcacacatttcaactggtcgtcagcccaggttccg
gagccggacgctattaaggagtcccttctgtacctgtacacagacaggacctgggtgccc
tatattttctccctgtccttggagtctctgaaatgcttccgtgtgagaaatgaggagaag
atgctgagtgacagccatggagtggagaccattcgagatgtcctgccagacaccagcctc
gggggcccggccttcttcaaaatcatcacagccaaggccgtcctgaagctgcaggctggg
aacgccgaggaggccgccctgtggagggacctggtgcgcaaggtcctggcgtcttacttg
gagacggctgaggaggcagtgacacttggcgggagtctggacgaaaactgccaggaggtg
ctgaagtttgccacgcgggagaatggcttcctgctgcagtacctggtggccatccccacg
gagaagggcttggactcccagggctgcttctgtgcaggctgctccagacagatcggcttc
tcctttgtacgacccaagctctgtgccttctctggcctctattactgtgacatctgccac
caagatgacgcctcagtgatcccggccaggatcatccacaactgggacctcaccaagcgc
ccggtctgccggcaggccctgaagttcctgatgcagatccgggcccagcccctcatcaac
ctgcagctggtgaatgcctcgctgtacgagcatgtggagcggatgcacctcatcggcagg
agccgggagcagctgaagcttctaggggattacctgggcctgtgccggagcggcgccctg
aaggagctgagcaagagactcagccacaggaattacctcttagagtctcctcacaagttc
agtgtcgctgacctccagcagatcgcagagggcgggtatgaagggttcctccaggcgctg
atcgagttcgcctcccagcacgtctaccactgcgacctgtgcacccagcgcggcttcatc
tgccagatctgccaccaccacgacatcatcttcccctttgagtttgacaccacagtcagg
tgtaccgagtgcaagaccgtcttccaccagagctgccaggacgtggtgaagaagggctgc
ccccgctgtgcccgccggcgcaagtaccaggagcagagcgccctcgcctga
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