Oryctolagus cuniculus (rabbit): 100340005
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Entry
100340005 CDS
T03373
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04064
NF-kappa B signaling pathway
ocu04217
Necroptosis
ocu04621
NOD-like receptor signaling pathway
ocu04657
IL-17 signaling pathway
ocu04668
TNF signaling pathway
ocu05163
Human cytomegalovirus infection
ocu05168
Herpes simplex virus 1 infection
ocu05169
Epstein-Barr virus infection
ocu05170
Human immunodeficiency virus 1 infection
ocu05200
Pathways in cancer
ocu05203
Viral carcinogenesis
ocu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100340005
04668 TNF signaling pathway
100340005
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100340005
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100340005
04657 IL-17 signaling pathway
100340005
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100340005
05203 Viral carcinogenesis
100340005
09162 Cancer: specific types
05222 Small cell lung cancer
100340005
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100340005
05168 Herpes simplex virus 1 infection
100340005
05163 Human cytomegalovirus infection
100340005
05169 Epstein-Barr virus infection
100340005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100340005
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100340005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-TRAF_2
zf-C3HC4_4
TRAFD1-XIAF1_ZnF
DUF4941
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-RING_6
PDZ_3
DUF5713
DUF4279
Motif
Other DBs
NCBI-GeneID:
100340005
NCBI-ProteinID:
XP_002717577
Ensembl:
ENSOCUG00000009132
UniProt:
G1SWL7
LinkDB
All DBs
Position
16:23977530..24021263
Genome browser
AA seq
558 aa
AA seq
DB search
MAYSEEPGGIHLGFIRQNSGSSISLDFEPNAEYRFVEQLEERYKCAFCHSVLHNPHQTGC
GHRFCQHCILSLRELNTVPICPVDKEVIRSQEVFKDNCCKREVLNLHVYCKNAPGCNAKV
ILGRYQEHLQQCLFQVVQCSHDSCQEPVLRRDLNEHLSAYCQFREEKCLYCKKDVVVMDL
QNHEENLCPEYPVSCPNKCLQIIPRTEVNRHLAVCPEAEQDCPFKQYGCTVKEKRGSLQE
HEHSALREHMLLVLEKNFRLEEQISDLCKSLEQKESKIQQLAETVKKFEKEFKQFAQLFG
KNGSFLSNIQVLASHMDKSAWLEAQVRQLLQMVNQQQNKFDLRPLVEAIDTVKQKITLLE
TNDQRLVVLEGETSKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKKKEA
VDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKRNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIK
EDTLFLKVAVDLTDLEDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcggaggagccagggggcatccacttgggtttcatccggcagaattcaggc
agctccatttccttggactttgagcccaacgccgagtaccggtttgtggagcagctggag
gagcgctacaaatgtgccttctgccactcggtgttgcacaacccccaccagacgggttgt
ggccaccgcttctgccagcactgcatcctgtccctgagagaactgaacacagtgccgatc
tgccctgtggataaggaggtgatccgatctcaggaggtgtttaaggacaattgctgcaaa
agggaagtcctcaacttacacgtatattgcaaaaatgctcccggatgcaacgccaaggtt
attctgggacgataccaggagcacctccagcagtgcctgttccaggttgtgcagtgttcc
catgacagctgtcaggagccagtgctgcggagagatctgaacgagcatctgagtgcctac
tgccagtttcgagaggaaaaatgcctgtattgcaaaaaggatgtggtggtcatggatctt
cagaatcacgaggaaaacttgtgtcctgagtacccggtgtcgtgtcccaacaagtgtttg
cagattattccaagaaccgaggtgaaccgccacctggctgtgtgccccgaggccgagcaa
gactgtccttttaagcagtatggctgcactgtgaaggagaagcggggcagcttgcaggag
catgagcactcggccttacgggagcacatgcttctggtgttggaaaagaacttccggctg
gaagagcagatttctgacttatgtaagagcctagagcagaaagaaagtaaaatccagcag
ctagcagagactgtgaagaaatttgaaaaggagtttaagcagtttgcacagttgtttggt
aaaaacggaagcttcctctccaacatccaggtccttgctagtcacatggataagtccgct
tggctagaagctcaggtgcggcagctattacagatggttaaccagcaacaaaataaattt
gacctgagacctttggtggaagccattgatacagtgaaacagaaaataaccctgctggaa
accaacgatcagagattagttgttttagaaggggagactagcaaacacgatgcccacatc
aatatccacaaagcacagctgaataaaaatgaagagcgatttaagctgctagagggtgcc
tgctacaatggaaagctcatctggaaggtgaccgattacaagatgaagaagaaggaggcg
gtggacgggcacactgtgtccatcttcagccagcccttctacaccagccgctgcggctac
cggctctgtgccagagcatacctgaatggggacgggtccgggaaggggacgcacctgtcc
ctgtactttgtggtgatgcgaggggagtttgactcgctgctgcagtggccattcaggcag
agggtgaccttgatgctgctggaccagagtggcaaaagaaaccacattatggagaccttc
aaggctgaccccaacagcagcagctttaaaagacccgacggggagatgaacattgcctct
gggtgtccccgctttgtggctcattccactttggagaatgccaagaacacctacatcaaa
gaggacaccttgttcttgaaagtggccgtggacctcactgacctggaggacctctag
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