KEGG   Oryctolagus cuniculus (rabbit): 100340259
Entry
100340259         CDS       T03373                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X2
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu00900  Terpenoid backbone biosynthesis
ocu01100  Metabolic pathways
Module
ocu_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    100340259
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ocu01006]
    100340259
Enzymes [BR:ocu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     100340259
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     100340259
    2.5.1.29  geranylgeranyl diphosphate synthase
     100340259
Prenyltransferases [BR:ocu01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   100340259
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 100340259
NCBI-ProteinID: XP_002717392
Ensembl: ENSOCUG00000013581
LinkDB
Position
16:52500182..52519462
AA seq 300 aa
MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLEDVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIKHLSKMFKEENE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaagactcaagaaacagtccaaagaattcttctagaaccctataagtacttgctt
cagttaccaggtaaacaagtgcgaaccaaactttcacaggcatttaatcattggctgaaa
gttccagaagacaaactacagattatcattgaagtgacagaaatgttacataatgccagt
ttactcatcgatgatatcgaagacaactcaaaactccgacgtggctttccagtggcacac
agcatctatggaattccatctgtcatcaattctgccaattatgtgtatttccttgggtta
gagaaagtcttaacccttgatcacccagatgcagtgaagctttttacccgccagcttttg
gaacttcatcagggacaaggcctagatatttactggagggataattacacttgccccaca
gaagaagaatataaagctatggtgctgcaaaagacaggtggcctatttggattagcagtg
ggtctcatgcagttgttctctgattacaaagaagatttaaagccactgcttgatacactt
gggctctttttccaaattagagatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagtttttgtgaagatctaacagagggaaaattctcgttccctactattcatgct
atttggtcgaggcctgaaagcacccaggtgcaaaatatcctgcgccagagaacagaaaac
atagatattaaaaaatactgtgtacattatcttgaggacgtaggttcttttgaatacact
cggaatactctaaaagagcttgaatctaaagcctacaaacaaattgatgcacgtggtggg
aaccctgagctagtagcgctaataaagcacctaagcaagatgttcaaagaagaaaatgag
tga

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