Oryctolagus cuniculus (rabbit): 100342431
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Entry
100342431 CDS
T03373
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X5
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100342431
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
100342431
Domain-containing proteins not elsewhere classified [BR:
ocu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
100342431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
100342431
NCBI-ProteinID:
XP_008252781
Ensembl:
ENSOCUG00000009598
LinkDB
All DBs
Position
2:complement(153253574..153692954)
Genome browser
AA seq
1651 aa
AA seq
DB search
MAGAWLRWGLLLWAGLLASCAHGRVRRITYVVRPGPGLAAGALPLGGPPRSRTFNVALNA
RYSRSSAAVGAPSERTRRTSQQGGAALQGLRPPPPEPARAGAPGGQLRPKPGGHPAPAPF
AKPGRQAVRPKAPPETQGGGSRLQVHQKQQLQGVNVCGGQCCHGWSKAPGSQRCTKPSCV
PPCQNGGMCLRPQLCVCKPGTKGKACEITMAQDTSAPVFGGQNPGAASSWVPPEQAAKRT
SAKKADALPRVSPVAQMTLTLKPKPSAGLSQQIHSHVAPLSSQNVVMHRGQSQEYVLKPK
YFPAQKMISGEQSTEGSFPLRYGPDPVAAPFQFICHLPCMNGGQCSARDKCQCPPNFTGK
LCQIPVHGASVPKLYQHSQQPGKALGTHVIHSTHTLPLTMTSQQGVKVKFPPNIVNIHVK
HPPEASVQIHQVSRIDGPTGQKVKEAQPSQPQMAYQGLPPQKTQTVHSTYSHQQVIPHVY
PVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFHKCQKCPKKPSYHGYNQ
MIECLQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFGPDPTFSSCVPD
PPVISEEKGPCYRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEI
CPGGMGYTVSGVHRRRPIHHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSR
EHGPGVAEPEVATTPPEKEIPSLDQEKTKLEPGQPQLSPGVSTIHLHPQFPVVIEKTSPP
VPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYEGYKFSE
QQRKCVDIDECAQVQHLCSQGRCENTEGSFLCICPAGFMANEEGTNCVDVDECLRPDVCG
EGHCVNTVGTFRCEYCDSGYRMTRRGHCEDIDECLVPSTCPDEQCVNSPGSYQCVPCTEG
FRGWNGQCLDVDECLEPNICTNGTCSNLEGSYMCSCHKGYNPTPDHKHCKDIDECEQGNL
CIHGQCRNTDGSFRCTCGQGYQLSAAKDQCEDINECQHHHLCTHGQCRNTEGSFQCVCDQ
GYRASALGDHCEDINECLEDRSVCQGGDCINTEGSYDCTCPEGFQLNDNKGCQDINECEQ
PGLCGPQGECLNTDGSFHCVCEQGFSISADGRTCEDIDECVNNTICDSHGFCDNTAGSFR
CLCYQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADENQEYSPMTGQCR
TRASEDLHVDQPREEKKECYYNLNDASLCDNVLAPNVTKEECCCTSGAGWGDNCEIFPCP
VLGTAEYTEMCPRGKGFVPAGESSYDLGGDNYKDADECLLFGQEICKNGFCLNTQPGYEC
YCKQGTYYDPVKLQCFDMDECQDPSSCIDGQCINTEGSYNCFCTHPLVLDASGKRCIRPT
ESNEQIEETDVYQDLCWEHLSEEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDS
DDYAQLCNIPVAGRRRPYGRDALVDFSEQYTPEADPYFVQDRFLNSFEELQAEECGILNG
CENGRCVRVQEGYTCDCFDGYHLDMAKMTCIDVNECDELNNRMSLCKNAKCINTEGSYKC
LCLPGYVPSDKPNYCTPLNTALNLEKDSDLE
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcctggctcaggtgggggctcctgctctgggcagggctgctggcgtcgtgc
gcacacggccgggtgcggaggatcacgtacgtggtgcgcccgggccccggcctggcggcg
ggcgccttgcccctgggcgggcccccgcgatcgcggaccttcaacgtcgcgctcaacgcc
aggtacagccgcagctcggcggccgtcggcgccccctcggagcggacccggcgcaccagc
cagcagggcggcgcggccctacaggggctccggccaccgccgccggagcccgctcgtgcc
ggggcccccggcgggcagctccgccccaagcccggcggccacccggcgcctgccccgttc
gccaagcccggcaggcaagcggtgcgccccaaagcgccgccggagacccaaggcggcggc
tcgaggctgcaggttcaccagaagcagcagttgcagggggtcaatgtctgtggcgggcag
tgctgccacggctggagtaaggcccctggttcgcagaggtgcaccaaaccaagctgtgtc
ccgccatgccagaatggagggatgtgtctccggcctcagctctgtgtgtgcaaaccaggg
accaagggcaaagcctgtgagataaccatggcccaggacacctcggcaccagtctttgga
gggcagaaccctggcgctgcctcctcctgggtccctcctgagcaagcggccaagcgcact
tcagccaagaaggcagacgctctaccgcgtgtcagtcctgtggcccagatgaccttgacc
ctgaagccgaagccttcagcaggactctcccagcagatccattctcacgtggcgccgctg
tcctcacagaacgtggtgatgcatcgaggccagagccaggagtatgtgctcaagcccaag
tactttccagcccagaagatgatttccggagaacagtccactgaaggctccttccctttg
agatacgggccggatccagtcgcggctccttttcagtttatctgccatcttccgtgtatg
aatggtggccagtgcagtgcacgagacaaatgtcagtgccctcccaacttcacaggaaag
ctttgtcagatccccgtccatggtgccagcgtccctaaactttaccagcattcccagcag
ccaggcaaggctctggggacgcacgtcatccattctacacataccttgcctctcaccatg
accagccagcaaggagtcaaagtgaaatttcctccgaacatagtgaatatccacgtgaag
catcctcctgaagcttccgtgcagatccaccaggtttcaaggatcgacggcccaacaggc
cagaaggtgaaagaagctcaaccaagccaaccccaaatggcttaccagggacttcctccc
cagaagacccagactgtgcattccacgtactcgcaccagcaggtcattcctcacgtctat
cctgtggctgccaagacacagcttggccggtgcttccaggaaaccattgggtcacagtgc
ggcaaagctctccctggcctttcgaagcaagaggactgctgtggaactgtgggtacctcc
tggggctttcacaaatgccagaaatgccccaagaaaccatcttatcatggatataatcaa
atgatcgaatgcctacaaggttataagcgagtcaacaataccttctgtcaagatattaat
gaatgccaactacaaggtgtgtgccctaatggtgagtgtttgaataccatgggcagctat
agatgtacctgcaaaatgggatttgggccggatccgaccttttcaagttgtgttccggat
ccccctgtgatctcggaagagaaagggccctgttaccgacttgtcagttccggaaggcag
tgtatgcaccctctgtctgtccacctcaccaagcagctctgctgttgtagtgtgggcaag
gcctggggcccacactgtgagaaatgtccccttccaggcacagctgcttttaaggaaatc
tgtcctggtggaatgggttatacagtttctggcgttcatagacgcaggccaatccatcac
catgtaggtaaaggacctgtatttgtgaagccaaagaacactcaacctgttgctaaaagt
actcatcctccacctctcccagccaaggaagagccagtggaggccctgaccttctcccgg
gaacacgggccaggagtggcggagccagaagtggcaactacaccccctgagaaggaaatt
ccttctttggatcaggagaaaacaaaacttgagcctggtcaaccccagctctctccaggc
gtttcaactatccatcttcacccacagtttccagtagtgattgaaaaaacatcaccccct
gtgcctgtagaagtagctcctgaagcttctacatcaagtgccagccaagtgatcgcacct
actcaggtcacagaaatcaatgaatgtactgtgaatcctgatatctgtggagcaggacac
tgcattaacctacctgtaaggtatacctgtatatgctatgagggttacaagttcagtgaa
caacagcggaaatgtgttgatattgatgaatgtgctcaggtccagcacctgtgctcccag
ggacgctgtgaaaacacggaagggagtttcctgtgtatatgccctgcgggatttatggcc
aatgaggagggtaccaactgcgtagatgtggatgagtgcctgaggccagatgtctgtggg
gaagggcactgcgtcaacaccgtgggcaccttccggtgtgaatactgcgacagtgggtac
cgtatgacccggcgtggccactgtgaggatatcgacgagtgtttggttccaagtacttgt
ccggatgaacagtgtgtgaattctcctggatcttaccaatgtgttccctgcacagaagga
ttccgaggctggaatggacagtgcctcgatgtggatgagtgcctggaaccaaacatctgc
acaaatggtacttgctccaaccttgaaggctcctacatgtgttcgtgtcacaagggctat
aacccgactccagaccacaagcattgtaaagatatcgatgaatgtgagcaagggaatctc
tgcatccatgggcagtgcagaaacaccgacggctccttcaggtgtacctgtggccagggg
taccagctgtctgcagctaaggaccagtgtgaagacattaatgaatgccagcaccatcac
ctctgcactcatgggcagtgcaggaacaccgagggctctttccagtgtgtgtgtgaccag
ggctacagagcatctgctcttggagaccactgtgaagatatcaacgaatgcttggaggat
agaagtgtttgccagggtggagactgcattaatactgaagggtcgtatgactgtacttgc
ccagagggattccagctaaatgacaacaagggctgtcaagatattaatgaatgtgaacag
ccagggctctgtggtccccagggggagtgtctaaacacagacggctcttttcattgtgtc
tgcgaacagggcttctccatctctgccgacggccgcacctgcgaagatattgatgaatgt
gttaacaacactatttgtgacagtcacgggttctgtgacaatacagctggctccttccgc
tgcctctgttatcagggctttcaagccccacaggatgggcaagggtgtgtggatgtgaac
gaatgtgagctgctcagtggcgtgtgtggcgaagccttctgtgaaaatgtggaggggtcc
ttcctgtgtgtgtgcgctgatgaaaaccaggagtacagccccatgaccgggcagtgccgc
acacgggcctccgaagatttacatgtagaccaacccagagaagagaagaaagaatgctac
tataatctcaatgacgccagtctctgtgataacgtgctggcccccaatgtcaccaaagaa
gaatgctgctgtacctcaggcgctgggtggggcgataactgtgagatctttccctgcccg
gtcctggggacagctgagtatacagaaatgtgtcctagagggaaaggctttgtccctgct
ggagaatcctcttacgaccttggaggtgacaactataaagatgcagatgaatgcctactt
tttggacaagaaatctgcaaaaatggtttctgtttgaacactcagcctggctatgagtgc
tactgtaagcaagggacctactatgatcccgtcaaactgcagtgcttcgatatggatgaa
tgtcaagaccccagtagttgtattgatggccagtgtattaatacagaaggctcctataat
tgcttctgtacccacccattggtcctggatgcttcaggaaaaagatgcatacggccaact
gaatcaaatgaacaaatcgaagaaaccgatgtgtaccaggacctgtgctgggaacatctg
agtgaggagtacgtgtgcagccggcctctcgtgggcaagcagacgacgtacacggagtgc
tgctgcttgtatggagaggcctggggcatgcagtgtgccctctgccccatgaaggactca
gatgactacgcccagctgtgtaacatcccagtggcaggacgccggcggccatacggacga
gacgccctggttgacttcagtgaacagtacactcccgaagctgatccctacttcgttcag
gaccggtttttaaatagctttgaagagttgcaggctgaggaatgtggcatcctcaatggc
tgtgaaaacgggcgttgtgtgcgggtccaggaaggctacacctgtgactgctttgacggg
taccacttggatatggccaagatgacctgtatcgatgtaaatgaatgtgatgagttgaac
aaccggatgtctctctgcaagaacgccaagtgcattaacaccgaggggtcctacaagtgt
ttgtgtctgccaggctacgtaccttctgacaagccaaactactgcactccattgaacacc
gccttaaatttagagaaagacagtgacctggagtga
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