Oryctolagus cuniculus (rabbit): 100343190 Help Entry 100343190         CDS       T03373                                  Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04010   MAPK signaling pathway ocu04064   NF-kappa B signaling pathway ocu04120   Ubiquitin mediated proteolysis ocu04140   Autophagy - animal ocu04144   Endocytosis ocu04380   Osteoclast differentiation ocu04620   Toll-like receptor signaling pathway ocu04621   NOD-like receptor signaling pathway ocu04622   RIG-I-like receptor signaling pathway ocu04657   IL-17 signaling pathway ocu04722   Neurotrophin signaling pathway ocu04936   Alcoholic liver disease ocu05132   Salmonella infection ocu05133   Pertussis ocu05135   Yersinia infection ocu05140   Leishmaniasis ocu05142   Chagas disease ocu05145   Toxoplasmosis ocu05152   Tuberculosis ocu05160   Hepatitis C ocu05161   Hepatitis B ocu05162   Measles ocu05168   Herpes simplex virus 1 infection ocu05169   Epstein-Barr virus infection ocu05170   Human immunodeficiency virus 1 infection ocu05171   Coronavirus disease - COVID-19 ocu05200   Pathways in cancer ocu05222   Small cell lung cancer ocu05235   PD-L1 expression and PD-1 checkpoint pathway in cancer ocu05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100343190  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     100343190  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100343190    04140 Autophagy - animal     100343190  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100343190    04657 IL-17 signaling pathway     100343190   09156 Nervous system    04722 Neurotrophin signaling pathway     100343190   09158 Development and regeneration    04380 Osteoclast differentiation     100343190  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100343190    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100343190   09162 Cancer: specific types    05222 Small cell lung cancer     100343190   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100343190    05161 Hepatitis B     100343190    05160 Hepatitis C     100343190    05171 Coronavirus disease - COVID-19     100343190    05162 Measles     100343190    05169 Epstein-Barr virus infection     100343190   09171 Infectious disease: bacterial    05135 Yersinia infection     100343190    05133 Pertussis     100343190    05152 Tuberculosis     100343190   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100343190    05140 Leishmaniasis     100343190    05142 Chagas disease     100343190   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100343190   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     100343190  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100343190    04121 Ubiquitin system [BR:ocu04121]     100343190 Enzymes [BR:ocu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100343190 Membrane trafficking [BR:ocu04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100343190 Ubiquitin system [BR:ocu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100343190 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-TRAF_2 Sina_ZnF SlyX TRAF3_RING RING_XB3-XBAT31 U-box zf-RING_11 EzrA Spc29 DUF7310 DUF4455 DUF3450 PspA_IM30 Med21 UPF0242 Myosin_tail_1 DUF16 TMF_DNA_bd Motif Other DBs NCBI-GeneID:  100343190 NCBI-ProteinID:  XP_002709100 Ensembl:  ENSOCUG00000012011 LinkDB All DBs Position 1:complement(189556117..189577862) Genome browser AA seq 540 aa AA seqDB search MSLLNCENSCGSGQSESDCCAAMASSCSAAAKDDSVSGTASTGNLSGSFVEDIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNEGCLHKMELRHLEDHQAHCGFALVNCPQCQRPFQKCQINTHILK DCPRRQVSCINCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHEKMQRNHLARHLQEKTQLHMRMLAQAVHSLNLALTPIPPRDVPQYDVPSQ PRVPSGYPEGHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVA EIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQR CANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQRP TIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV NT seq 1623 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatctggccagtctgaaagtgactgctgt gcggccatggccagctcatgcagtgctgcagccaaagatgacagtgtgagtgggactgcc agcacggggaacctttctggctcgtttgtggaagacatccagggatatgatgtggagttc gacccacccctggaaagcaagtatgaatgccccatctgcttaatggcgttacgggaagca gtgcagaccccatgcggccataggttctgcaaagcctgcatcatcaaatcaataagggat gcaggccacaaatgtccagttgacaatgaaatactattggaaaatcagctatttcctgac aattttgcaaagcgagagattctttctctgacagtgaagtgtccaaatgaaggttgtttg cacaagatggaactgaggcatcttgaggatcatcaagcacattgtgggtttgctcttgtg aattgtcctcagtgccaacgtcctttccagaaatgccaaattaatactcacatcctcaag gattgtccaaggagacaagtttcttgtataaactgtgcggtatccatggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatttgtgaatactgcaatacc atgctcatcagagaacagatgcctaatcattatgatctagactgccctaccgctccaatt ccatgtacattcagtacttttggctgccatgaaaagatgcagaggaatcacttggcacgc cacctacaagagaaaacccagttgcacatgagaatgttggcccaggctgttcatagtttg aaccttgctttaactcccatacctccacgtgatgtgcctcagtacgatgttccttctcag ccccgggttccctccgggtatccagagggccacaacttccaggaaactattcagcagtta gagggtcgccttgtaagacaagaccatcaaattagggagctgactgcaaaaatggaaact cagagcatgtacgtaagtgagctcaaaagaactattcgaacccttgaggacaaagttgct gaaattgaagcacagcagtgtaatggaatttacatctggaagatcggcaactttgggatg catttaaaatctcaagaagaggagaaacctgttgttattcacagccctggattctacacg ggcaaacccggatacaaactctgcatgcgcttgcaccttcagttaccaactgctcagcgc tgtgcaaactatatatccctctttgtgcatacaatgcaaggagagtatgacagccacctt ccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaagcacccata aggcaaaaccatgaagagataatggatgccaaaccagagttacttgccttccagcggccc acaattccacggaacccaaaaggttttggctatgtaacttttatgcaccttgaagcctta cgacaaagaacctttataaaggatgatacgttattagtgcgctgtgaagtctctacccgc tttgacatgggtagccttcggagggagggttttcagcctcgaagtactgatgcaggggta tag

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