Oryctolagus cuniculus (rabbit): 100345430
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Entry
100345430 CDS
T03373
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100345430
09123 Folding, sorting and degradation
03018 RNA degradation
100345430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100345430
03041 Spliceosome [BR:
ocu03041
]
100345430
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100345430
mRNA degradation factors
5'-3' decay
Lsm complex
100345430
Spliceosome [BR:
ocu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100345430
Complex C
U2 snRNP components
100345430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
100345430
NCBI-ProteinID:
XP_002714873
Ensembl:
ENSOCUG00000027653
UniProt:
G1TWC5
LinkDB
All DBs
Position
12:68980200..68980888
Genome browser
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaacactgtagaggagccgctggatctc
atcaggctcagcctggatgaacgaatttacgtgaaaatgagaaacgaccgagagcttcgc
ggcagattgcacgcttacgatcagcatttaaatatgatactgggagatgtggaagagacg
gtgactaccatagaaatcgatgaagaaacgtacgaagagatctataaatcaaccaaacgt
aacatcccgatgctctttgtccggggagacggtgtcgtcctggtcgcccctccgctgaga
gtcggctga
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