KEGG   Oryctolagus cuniculus (rabbit): 100345815
Entry
100345815         CDS       T03373                                 
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100345815
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    100345815
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C VIGSSK SWI2_SNF2
Other DBs
NCBI-GeneID: 100345815
NCBI-ProteinID: XP_008255943
Ensembl: ENSOCUG00000000442
UniProt: G1SDB6
LinkDB
Position
1:88850436..88979072
AA seq 1519 aa
MEPCAAEPRAGASRPDRWHPGERCLAPSPNNEKLCEASIKSITVDENGRSFAVVLYSDLQ
ERKIPLKRLQEVKSVKDCPRNFIFDDEDLEKPYFPGRKFPSSSAVAFKLSEEGDSIPYTI
NRYLRDYQREGTQFLYGHYRQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNM
PEFLLRSMKKELPSSMTKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELMRI
KQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEVMKALKCNVRIGL
TGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMRR
LAGRMAGSFLRRTKTLIKDQLPKKEDRMVYCSLTEFQKAVYQTVLETEDVTLILQSSKPC
TCNSGRKRRSCCYKTNSRGDEVKTLCLSYLTVLQKVANHVALLQAASTSKQETLIKRICD
QVFSKFPDFVQKSKDAAFETLSDPKYSGKMKVLQQLLNHCRRNRDKVLLFSFSTKLLDVL
QQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVIL
FDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQLYKQQLHCVVVGSEN
AKRYFEAVQGSKEHQGELFGICNLFKLRSQGSCLTRDILEREGQVEAGIMTATTWLKEGP
PAHNLETSKEPVSQEPRGPGRAAEPAREAWELCSDFSEDESGGTSRVKTAVSKALESSKA
PGPPGQLTLLQCGFSKLLEAKRAAVEDSDGSVTSDDASSDEHGQPSNLSAGAKEAGCQGS
QHSLGASRHPSLNDTLSPSEKSIFDKNEKTLEQSVSSESDDEKNFKNTAHPCILQNVTES
EDSDVIFPTQYTAQNKPALDGSEDSETENPIKIRNNGGGKKTDDRGNGQISKQSNPEVCY
ERKGPGDVSDESDDIEISPKSRVRKQRASRPRRKKEVKRELYNSTNTTKKATRLRTVRED
SNSQIIDDFSSSDDDSPVSPFSFSKQSHRSKTIKDRISLSSKLPGHCKKNSPFTPRELPN
ENDINQKQMSESMDKFLDGVQEVAYIHSNQNVIGSSKAENHMSRWAARDVFELKQFSQLP
ANIAVCSAKTCEENRPTERGQPPSEGGVSLPLCVPHPVSQKKKRVYRTEQTTFIIGETPR
GIRRKQFEEMASYFNLSSVKEFARQITSATSEERREMLQDFYASQYPEVKGFFTADAASE
SIKSASVRSKSQEGDSRIRRRLSGSEALTFKESTNSISHTCSPAAHKGKSVQFPSHGSCQ
EEALPSNAGTLGSTQGVDDGKNSHASKGAGASSSLDGNSKGQERRWADAGKDQQGTSGTG
VSRSRLLCKPESRKPEGPVAGGASVGGLLGDTSILEDLFKTPRSGPTQLPRRALSGPVEK
AKQRPKDFWDILNEQSADSLSKFTDLAVIETLCEKAPSRSRGERETSLWKSNEKFLWKTF
HSSDTDENTTNNTQRGAEA
NT seq 4560 nt   +upstreamnt  +downstreamnt
atggagccctgtgccgcggagccccgcgccggagcctctcgcccagacagatggcatcca
ggagaaagatgtcttgcgccttctccaaataatgaaaagctttgtgaagcaagcataaaa
tcaatcacagtggatgaaaatgggagatcatttgctgtcgtgttatactcagatcttcaa
gaaaggaaaatacctcttaaaagacttcaagaagtaaaatctgttaaagattgccccagg
aattttatatttgatgatgaagatttggaaaaaccatatttcccaggtcgcaaatttcca
tcctcatctgctgttgcttttaaattatctgaagaaggagactccatcccttacactatt
aataggtacttgagagactaccaaagggaaggaactcagtttctctatggacactacaga
caaggaagagggtgtattctcggtgacgacatgggacttggaaaaacagtacaggttatt
tcatttctggctgcagttttacataaaaagggaactcgtgaggatattgaaaataacatg
ccagagtttttactaagaagtatgaaaaaggaactcccttcttctatgacaaaaaagatg
ttcttaatagtcgcccctctgtctgtcctctataactggaaagatgaattggacacctgg
ggatatttcagagtcactgttttacacggtaacagaaaggacaatgaactgatgcgtata
aagcagaggaagtgtgaaattgcactgaccacttatgagacactacgcttatgtctggat
gaactgaacagtttggagtggtctgccatcattgtggatgaggctcacagaattaagaac
cccaaggccagagtgaccgaagtcatgaaggctttgaagtgtaacgtccgcattggcctc
accggaaccattcttcagaacaacatgaaggaactgtggtgtgtgatggactgggctgtg
ccaggacttttaggtagtaggatccacttcaagaagcagttttctgacccagtggaacat
ggtcagagacacacggcgacaaaaagggagctcgctactggccggaaggccatgcggagg
ctcgcgggaaggatggcgggcagcttcctccggcggaccaagactctcatcaaggaccag
ctgcccaagaaggaagaccggatggtatattgttctctgacagagttccaaaaagctgtc
tatcaaacagtgttagaaaccgaagatgtgactttgatacttcagtcttctaagccttgc
acctgcaacagtggccgcaaaaggagaagttgttgttataagaccaattcccgcggtgac
gaggtgaagaccttgtgcctcagctacctcacggtccttcagaaggtggccaatcacgtg
gccctgctgcaggctgctagcacctccaaacaggagacacttatcaaaaggatatgtgat
caagtattttcgaaattcccagattttgtgcagaaaagcaaagatgcagcctttgaaaca
ctttctgaccctaaatacagtgggaagatgaaggtccttcagcagcttctgaatcactgc
aggaggaacagggataaagttctcctcttctccttctccaccaagttgctggatgtgctg
cagcagtactgcatggcgtctggccttgattaccgccggcttgatggaagtacgaagtcc
gaggagaggctcaagatcgtcaaagagttcaacagcacacaggacgttaacatctgcctt
gtctctacaatggctggtggactaggccttaattttgttggtgccaatgttgtcatatta
tttgatcctacttggaatccagccaatgatctccaagctattgacagagcgtatagaatt
ggacaatgcagagatgttaaagtgctcaggctgatatccttggggactgtggaagagatc
atgtacttacggcagctgtacaagcagcaacttcactgtgtggtagttggaagtgaaaat
gccaagcgatactttgaagcagtccaaggatcaaaagagcatcaaggagagcttttcggg
atctgtaacctcttcaagctgagatcccaagggtcctgtctcacgagggacatcctggag
agagaaggccaagtggaagcagggatcatgacagctacaacgtggttgaaggagggacct
ccagcgcataacctagaaacatctaaagagcctgtcagtcaagaacccagaggcccaggg
cgagctgcggagccagccagggaggcatgggagctctgcagcgacttcagtgaggacgag
tcggggggaacctcgagagtaaagactgcagtaagcaaagcactggagtcgagcaaagct
cccggtcctccaggacagcttaccttactccagtgtggcttctctaaactgctggaggcc
aagcgtgcagcagtcgaggatagcgatggcagcgtcacctctgatgatgcaagctctgat
gagcacgggcagccctcgaacctttcagcaggcgccaaagaggctggctgtcaggggagc
caacattccctcggcgcttcacggcatcccagcttaaatgacaccttgagtccaagtgaa
aagtctatttttgataaaaatgagaagactttagaacagagtgtttcttctgagtctgat
gatgagaagaactttaaaaatactgcacatccctgcattttacagaatgtcacagaatcg
gaagatagtgatgtcatctttcccacacagtatacagctcagaataagccagccttggat
ggatctgaagattcggaaacagaaaatcctataaaaataagaaacaatggtggtggtaaa
aagactgatgacagaggaaatgggcagatttcaaaacaatcaaatcctgaggtctgttat
gaaagaaaaggccctggtgatgtcagtgacgaatctgatgacattgaaatttcccccaag
tcaagagtaagaaagcaaagagcatcaaggcctaggagaaaaaaggaagtcaaaagagaa
ctttacaattccactaacaccacaaagaaagcaacccgactgcgtactgtgcgtgaggat
agtaactctcagattattgatgatttctcatcctctgatgatgattcacctgtcagtccc
ttcagtttctctaaacagagtcacagatcaaaaactataaaagatagaatcagtctctct
tcaaaattgcctgggcattgtaagaaaaatagccctttcacaccaagggaacttccaaat
gagaatgacatcaatcaaaagcagatgagcgaatcaatggataaatttctagatggtgtt
caggaagtggcttacattcactcaaaccagaatgtgattggatccagcaaagctgaaaat
cacatgagtcgatgggcagcacgggatgtgtttgagctgaagcagttttcccagcttcct
gccaacatagccgtctgcagtgctaagacatgtgaagaaaacaggcctacagagagaggc
cagccaccaagtgaaggaggcgtttcacttcctctgtgcgttccgcaccccgtgagccag
aagaagaaaagggtctaccggacagagcagaccaccttcataatcggagagacgccaaga
ggaatccgcagaaaacaatttgaagaaatggcctcttactttaacctgtcttccgtaaag
gagtttgcgagacagataacgagtgccacatcagaagagcgccgggaaatgctccaagac
ttttatgcttctcagtacccggaagtgaaagggttcttcacagcagacgctgcttcagaa
tccatcaaatccgccagcgtcaggagtaaatcccaagaaggagactctcgtatcagaaga
aggctgtcgggttctgaagccttgacttttaaagagtcgaccaacagcatttctcacacc
tgcagcccagcagcccacaagggaaagtcagttcagtttcccagtcacggttcctgccaa
gaagaagcgcttcctagcaatgcaggaactcttggctctacccaaggggttgatgacggg
aaaaacagccacgcatccaaaggtgccggggcatccagttccctggacggaaactccaag
ggacaggagaggaggtgggcagacgccgggaaagaccagcagggcaccagcgggacgggc
gtttcaagaagcaggctgctctgcaagccggaaagcaggaagccagaaggccccgtggca
gggggcgcctctgtgggaggcctgctgggtgacacctccattcttgaggacctctttaaa
acgccccggagcggccccacacagctgccaaggagagccctttcagggcccgtggagaaa
gcaaagcagcggcccaaggatttctgggacatcttgaatgagcagagtgccgacagcctc
agtaaattcaccgacttggccgtcatcgagaccctgtgtgagaaagccccctccaggagc
agaggcgagcgagaaacgtctctctggaagtccaatgagaagtttttgtggaagacattc
cactcgagtgacacagatgagaacacaaccaacaacacgcagagaggagcagaggcctga

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