Oryctolagus cuniculus (rabbit): 100347269
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Entry
100347269 CDS
T03373
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu01524
Platinum drug resistance
ocu03440
Homologous recombination
ocu03460
Fanconi anemia pathway
ocu04120
Ubiquitin mediated proteolysis
ocu04151
PI3K-Akt signaling pathway
ocu05206
MicroRNAs in cancer
ocu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100347269
09124 Replication and repair
03440 Homologous recombination
100347269
03460 Fanconi anemia pathway
100347269
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100347269
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100347269
09162 Cancer: specific types
05224 Breast cancer
100347269
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100347269
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100347269
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100347269
03036 Chromosome and associated proteins [BR:
ocu03036
]
100347269
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100347269
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100347269
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100347269
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100347269
Multi subunit type E3
BRCC complex
100347269
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100347269
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100347269
BRCA1-A complex
100347269
BRCA1-B complex
100347269
BRCA1-C complex
100347269
BRCA complex
100347269
FA (Fanconi anemia) pathway
Downstream FA components
100347269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
BRCT_2
zf-RING_6
zf-Nse
zf-ANAPC11
zf-RING_10
zf-rbx1
RTT107_BRCT_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
100347269
NCBI-ProteinID:
XP_008269770
Ensembl:
ENSOCUG00000003883
UniProt:
G1SKM1
LinkDB
All DBs
Position
19:complement(41239950..41310578)
Genome browser
AA seq
1852 aa
AA seq
DB search
MDLSGVRVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKNDITKRSLQESTRFSQLVEELLKMIQAFELDTGLPFANSYDFSKKKNNSPEHQKE
DVSIIQSIGYRNRAKGLRKIEPKNPTLETSLSVQVSDLGIVRSLRTTHQIQPQNKSVYIE
LGSDSSEETVNKANYYSLGNEEFLQSTLQGANAEATLDPAKKAACVFSEKEITNIEPHQS
NNKDLTTVKKHATERHPEKYQGISISNLHVEPCGTDTHASSLQHENSSLLLTKDRMNVEK
AEFCNKSKQPGLARSQQSRWAESKETCNDRQTPSTEKKVVPNVDCLYGRKQQDKQKPSCP
ETSGDNQDVSWITVNSSIQKVNEWFSRSNEMLTPDDSLDRRSESNAKVTGALEVPKEIDG
YSGSTEKIDLLASESHNALICENKRVHSKPVENNIKDKIFGKTYHRKTSLPNLSHITEDL
TIGAFAAEPLVPCPPANKLKRKRRTSSGLQPEDFIKKVDLAVVPKTPAQINQGTDQTVDN
DQEMNITNRGNENETKGDYVQKETNANPTESLEKESSFRTKVEPISSSISNMELELNVHN
SKKPKKNRLRKKSSTRRVHALELVVNKKPSPPNHTELQIDSCTSSEEMNFDQIPVSHSRQ
VQVIEDTEPPTGARKNKPNEQISKRHASDVFPEVKLTSIPGVFTNCSSSNKLQESVNPSL
QRREIEENLDRVQVPNSALDPKDLLLCGERGLQTERSVESTSISLVPDTEYGTQDSISLL
GANTLGKAKTAANGHVSESTAIGNPKELIRDCLKDTGNDPDKCKDPLRSEVDQETSVAME
ESEFDTQYLQNTFMGSKRRSFALCSKPGDPEKECAAVCTRSNSSRKQSPEVTLEREQKEE
SQRKEEWKISHVQAADSTVGFPVVCQKEKAGDCAKWGIKEISRLCLSSQSKGSETELIAV
SKHGMSQNPYHMPPISPIKPSVKATRQVNLSGQRSEEHSVSSERAVGSESLIPSTVSTIS
QEYIRESALKGFSSSSINEGGSSANEVCSSVNEVGSSGENMQAQPGRSRAPELNAVLRLG
LMQPEVCEQSLPVSNSELPKLQRQEENEGVVQAVNRDFSSYLVPDSQEQSIGGRHASQIC
SETPDDLLDIYEIKENTSFAESGIKERSAVFSKSVQRGECSRTPSPSGHACLAQSHQREA
RKLESSEEHIPSEDEELICFQQLLFGKVTDRPSQSTRRSAVATECVSEKTEENFVSLKNS
LNDSDNEVTLSKASQEHPPSQGSECSGSLFSSQCSAVEDLNENTNSQDPFLMFDSPSKQM
RHQSESQQDTSDKELASDDEDNLQGQNVDANLGAAASGCESEASLSGVHSGLSSQSEILT
TQQRDTMQDNLLKLQEEMAQLEAVLEQNGSQPSYRPPSPLPDPCASEDPLNLQQNTSEKG
VLTSEKTSEYPISRNPKSLSVDKFRESPHHSNSKNKEPGAGRTSPSESQLFGNRWYTHSH
SSALRNKSCPPQEESVKEVGLEQRQLEDSEPQDSVSESYLPTQDTEGTPYLESGISLFSD
PESAPAEDRAPGPAPVCSSPDSRSTLKLPQFQVAESVQSPANDSAGCSSKEESLSLDKPE
SISSTERINKGISMVVSGLTPKEFMLVHKFARKYHITLTNVITEETTHVIMKTDAEFVCE
RTLKYFLGIAGGKWVVSYFWVTQSIKERKILDEHDFEVRGDVVNGRNHQGPKRARESQDR
KIFRGLEICCYGPYTNMPTDQLEWMVQLCGASVVRELSSFTRGTGVHPIVVVQPDAWTED
GGFHGIGQMCAASVVSREWVLDSIALYQCQELDPYLIPQSPAAAAEHSRPRV
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtctggagttcgtgttgaagaagtacaaaatgtccttaatgctatgcagaaa
atcttagagtgtccaatctgtctggaattgattaaagaacctgtttctacaaaatgtgac
catatattttgcaaattttgtatgctgaagcttctcaaccagaagaaagggccctcacaa
tgtcctttgtgtaagaatgatataaccaaaagaagccttcaagagagtacaagatttagt
caacttgttgaagagctattgaaaatgattcaggcttttgagcttgacacaggattgccc
tttgcaaacagttatgacttttcaaaaaagaaaaacaactctcctgaacatcaaaaggag
gacgtttctatcattcaaagtataggctaccgaaaccgtgccaaagggcttcgaaagatt
gaacccaaaaatcctacgttggaaaccagtcttagtgtccaagtctctgaccttggaatt
gtgagatctctgaggacaacgcatcagatacaacctcaaaataagtctgtctacattgaa
ttgggatctgattcttctgaagaaacagttaataaggcgaattattacagtctgggaaat
gaagaatttttacaaagcactcttcaaggagccaatgctgaagccactttggatcctgca
aaaaaggctgcttgtgtgttttctgagaaggaaataacaaatattgaacctcatcaatcc
aataataaagatttgaccactgttaagaagcatgcaactgagaggcatccagaaaagtat
cagggtatttctatttcaaacttgcatgtggagccatgtggcacagatactcatgccagc
tcattacagcatgagaacagcagtttattactcactaaagacagaatgaatgtagaaaag
gctgaattctgtaataagagcaagcagcctggcttagcaagaagccaacagagcagatgg
gccgaaagtaaggaaacatgtaatgataggcagactcccagcacagagaaaaaggtagtt
ccgaatgttgattgcctgtatgggagaaaacaacaggataagcagaaaccttcgtgccct
gagacctctggagataaccaagatgtttcttggataacagtaaatagcagcattcagaaa
gttaacgagtggttctccagaagtaatgaaatgttaactcctgatgattcacttgaccgg
cggtctgaatcaaatgccaaagtgactggtgcattagaagttccaaaggagatagatgga
tattctggttctacagagaaaatagacttactggccagtgagtcccataatgctttaata
tgtgaaaataaaagagtccattccaaaccagtagagaataatatcaaagataaaatattc
gggaaaacctaccacaggaagacaagcctccctaacttgagccacataactgaagatcta
actataggagcgtttgctgcggaaccactggtaccgtgtccacccgcaaataaattaaaa
cgtaaaagaagaacttcttcaggccttcaacctgaagattttatcaagaaggtagatttg
gcagttgttccaaaaactcctgcacagataaatcagggaactgatcaaacagtggacaat
gatcaggagatgaatattactaatcgtggtaatgagaatgaaacaaaaggtgattatgtt
cagaaagagacaaatgctaacccaacagaatccctggaaaaagaatcttccttcagaact
aaagttgaacctataagcagcagtataagcaatatggaactagaattaaatgtccataat
tcaaaaaaacccaagaagaataggctgaggaagaagtcctctaccaggcgtgttcatgca
cttgaactagtagtcaataagaaaccgagcccacctaatcatactgaactacaaattgat
agttgtactagcagtgaagaaatgaatttcgaccaaataccagtcagtcacagcagacag
gttcaagtcatagaagatacagaacctccaactggagctaggaagaacaagccaaatgaa
caaataagtaaaagacatgccagtgatgttttcccagaagtaaaattaacaagcatacct
ggtgtttttactaactgttcaagttctaataaacttcaagaatctgtcaatcctagcctt
caaagaagggaaatagaagagaaccttgacagagttcaagtgcctaatagtgccctagac
cccaaagatctcctgttatgtggagaaaggggcttgcaaactgaaaggtctgtggagagt
accagtatttcactggtacctgatactgaatatggtactcaggacagcatctcattactg
ggcgctaacacccttggaaaggcaaaaacagcagcaaatggacatgtgagtgagagcaca
gcaattggaaatcccaaggaacttatccgtgattgtttgaaagatactggaaatgacccg
gacaaatgtaaggatccattgagaagtgaagttgaccaagagacaagcgtagcaatggaa
gagagtgagtttgatactcagtatttacagaatacattcatgggttccaagcgtcgttca
tttgctctgtgttcaaaaccaggagatccagaaaaggaatgtgcagcagtctgtacccgc
tccaactcctcaaggaaacaaagtccagaagtcactcttgaacgtgaacaaaaagaagaa
agtcagagaaaggaagagtggaaaatcagtcatgtccaggcagccgatagcactgtgggc
tttcctgtggtgtgtcagaaagagaaggcaggtgattgtgccaaatggggcattaaagag
atctctaggctttgtctgtcatctcagtccaaaggcagtgaaactgagctcattgctgta
agtaaacatggaatgtcacaaaacccatatcatatgccaccaatttctcccatcaagcca
tctgttaaagccacacgtcaggtaaacctgtcagggcaaaggtctgaggaacattccgtg
tcatctgaaagagcagtgggaagcgagagcctcattccaagcacagtgagcacaattagc
caagagtacattagagaaagtgctttgaaaggattcagctcgagcagtattaatgaaggg
ggctctagtgctaacgaagtatgctccagtgttaatgaagtaggatccagtggtgaaaac
atgcaagcacaaccaggcagaagcagagcacctgagttaaatgctgtgcttagattaggt
cttatgcagcctgaagtctgtgagcaaagtcttcctgtaagtaattctgaacttcccaaa
ctccaaaggcaagaagaaaacgaaggagtagttcaggctgtgaacagagatttctcttcg
tatctggttcctgatagccaagagcagtctataggaggtaggcatgcttctcagatttgt
tctgagacacctgatgacctgttagatatttatgaaataaaggaaaataccagctttgct
gagagcggcattaaggaaagatctgctgtgtttagtaaaagtgttcagaggggagagtgc
agtagaacccctagcccttcaggccatgcatgtttggctcagagtcaccaaagagaagct
aggaaattagagtcctcagaagagcatatacctagcgaggatgaagagcttatctgcttc
caacaattactgtttggtaaagtaactgatagaccatcccaatctactagacgtagtgct
gttgccacagagtgtgtatctgagaaaacagaggagaacttcgtgtcattgaaaaatagc
ttaaacgactctgataacgaggtgacactgtcaaaggcatcccaggagcacccccccagc
cagggatcagaatgttccggtagcttgttttcttcccagtgcagtgcagtggaagacttg
aatgaaaatacaaactcccaggatcccttcttgatgtttgattctccttccaaacaaatg
agacatcagtctgaaagccagcaagatacgagtgacaaggaattggcttcagatgatgaa
gataatctccaaggacagaatgtggatgcaaacttaggtgcagcagcatctgggtgtgag
agtgaagcaagtctgtctggagtccactcagggctgtcctctcagagcgaaatcttaacc
actcagcagagggacaccatgcaagataaccttctaaaactccaggaggaaatggctcag
ctggaagctgtgttagagcagaatgggagccagccctcttacagacccccttcccccctg
cctgacccatgtgcctcggaggacccgctaaatctacaacagaacacatcagaaaaagga
gtattaacttcagagaaaactagtgaatatcctatcagccggaatccaaaaagcctttct
gttgacaagttccgggaatctccacatcattccaacagtaaaaataaagaaccaggagca
ggaaggacttccccttctgaatcccagttgttcgggaatagatggtacacgcacagccat
tcgagcgctcttcggaacaaaagctgcccacctcaagaggagtccgttaaggaagttggt
ttggagcagcggcagctggaagactctgagccgcaagattcagtgtcagagtcttatttg
ccaacacaagatacagagggcaccccttacttggaatctggaatcagcctcttctctgac
cctgaatctgctcctgctgaggacagagcccccgggccagctcctgtgtgcagctcacca
gattcacgatctacactgaagttaccccaatttcaggttgcagaatctgtccagagtcca
gctaacgatagtgctggatgcagttccaaggaagaaagtttaagcttggataagccagaa
tcaatatcctcaacagaaaggatcaacaagggaatatccatggtggtatcaggcttgacc
ccaaaagaatttatgcttgtgcacaagtttgccagaaaataccacatcactttaactaat
gtaattactgaagagactactcatgtcattatgaaaacagatgctgaatttgtgtgtgaa
cggacactgaaatattttctggggattgcaggaggaaagtgggtagttagctatttctgg
gtgacccagtcaattaaagaaagaaagatactggatgagcatgattttgaagtcagaggt
gatgtcgtcaacggaagaaaccaccagggtccgaagcgagcgagagaatcccaggacaga
aagatcttcaggggcttagaaatctgttgctatgggccctataccaacatgcccacagat
caactggagtggatggtacagctctgtggcgcctccgtggtgagggagctttcgtcattc
acccgtggcacaggagttcacccgattgtggtcgtgcagccagatgcctggacggaggac
ggtggcttccatgggattggacagatgtgtgcggcatccgtggtgagcagagagtgggtg
ttggacagcatagccctttatcagtgccaggagctggacccctacctgataccacagagc
cccgcagcagctgctgagcacagccggccacgtgtctag
DBGET
integrated database retrieval system
