Oryctolagus cuniculus (rabbit): 100350524
Help
Entry
100350524 CDS
T03373
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100350524
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100350524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
PFF1_TM
DUF6925
Motif
Other DBs
NCBI-GeneID:
100350524
NCBI-ProteinID:
XP_002719526
Ensembl:
ENSOCUG00000004347
UniProt:
G1SLL9
LinkDB
All DBs
Position
19:complement(46251445..46294367)
Genome browser
AA seq
1826 aa
AA seq
DB search
MASSSLPTVVPLGPECLRPFTRESLAAIERRAVEEEARQQRNKQMEVEEPERKPRSDLEA
GKNLPLIYGDPPPTVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFNIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
YGNDTWDDGRESWASNYTFDWDAYINDEGNFYFLEGANDALLCGNSSDAGHCPEGYECIK
AGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFY
LINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEEQEKAKAAQALEGGEAA
GDPTHSKDCNGSLDTAPGEKGAPRQSCSAESAISDAMEELEEAHQKCPPWWYKCAHKVLI
WNCCTPWVKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVF
TGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVF
KLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADC
SLPRWHMYDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLF
LALLLSSFSADSLAASDEDGEMNNLQIAIARIKWGIGFAKAFILGLLHGKILSPKDIMLS
LGEPGGAGGAGEAGESAPGDEKKEPPPEEEEDKDLKKDNHFLNHVGLADGPPPGIELDHL
NFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDSKKPLQPPDGNSSVCSTADYKPP
EEDPEEQAEENPDGEQPEECFTEACVQRCPFLYVDISQGRGKQWWTLRRACFKIVEHNWF
ETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFIVEMLLKWVAYGFKVYF
TNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNAL
LGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDVSEVNNKSECESLM
HTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPAYEVNLYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGAKKPQK
PIPRPQNKIQGMVYDLVTQQMFDIIIMILICLNMVTMMVETDDQSELKVDILYNINMVFI
VIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLA
RIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGI
DDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVRGDCGNPSI
GICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQ
FIDYCRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGE
MDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSVKQASYM
YRHGQNGGGDGDEAPEKEGLIADSMSKMYGPENRDSSAHSQEREKGSPEDASPAVGLQPG
SPPDTELLAAPALRQTVRPGVKESLV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggccagttcatctctgcccaccgtggtgcctctgggccccgagtgcctgcggcccttc
acccgggagtccctggcggccatagagcggcgggcggtggaggaggaggcccggcagcag
cggaacaaacagatggaggtggaggagccagagcggaagccacgcagcgacctggaggcc
ggcaagaacctgcccctcatctacggggaccccccgcccacggtcatcggcatccccctg
gaagacctggacccctactacagtgacaagaagaccttcatcgtcctcaacaagggcaag
gccatcttccgcttctcggccacgcccgccctctacatgctgagccccttcaacatcgtc
cggcgctgcgccatcaaggtgctcattcactcgctgttcagcatgttcatcatgatcacc
attctgaccaactgcgtgttcatgaccatgagtaacccgcccgcctggtccaagaacgtg
gagtacaccttcaccgggatctacaccttcgagtccctcatcaagatgctggcccgaggc
ttctgcatcgatgacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcacgatggcgtacctgacggagttcgtggacttgggcaacatctcagccctgaggact
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggcgccctgatccagtccgtgaagaagctgtcagatgtaatgatccttaccgtgttctgc
ctgagcgtcttcgccctggtggggctgcagctcttcatggggaacctgcggcagaagtgt
gtacgctggcccccgcccttcaacgacaccaacaccacgtggtatggcaacgacacgtgg
tacggcaacgacacgtgggacgacggccgcgagagctgggccagcaactacacctttgac
tgggacgcctacatcaacgacgaagggaacttctacttcctggagggcgccaacgacgcc
ctgctctgtgggaacagcagtgacgcggggcactgccccgagggttacgagtgcatcaag
gctgggcgaaaccccaactatggctacaccagctacgacaccttcagctgggccttcctg
gcgctcttccgcctcatgacacaggactactgggagaacctcttccagctgaccctgcga
gcagctggcaagacctacatgatcttcttcgtcgtcatcatcttcctgggctccttctac
ctcatcaacctgatcctggccgtggtggccatggcctacgcagagcagaatgaggccacc
ctggccgaggaccaggagaaggaggaggagttccagcagatgctggagaagttcaagaag
cagcaggaagaacaggaaaaggccaaggccgcccaggctctggaaggtggggaggcagcc
ggggaccccacccacagcaaagactgcaacggcagcctggacacggcgccaggagagaag
ggagccccgaggcagagctgcagcgcagaaagcgccatttcagacgctatggaggagctg
gaagaggcccaccagaagtgcccaccttggtggtacaagtgcgcccacaaagtgctcata
tggaactgctgcaccccttgggtgaagttcaagaacatcgtccacctgatcgtcatggac
cccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctgttcatggccatg
gagcactaccccatgaccgagcacttcgacaacgtgctctctgtgggcaacctggtcttc
acgggcatcttcacagccgagatggtgctgaagctgatcgccatggacccctacgagtat
ttccagcagggctggaacatctttgacagcatcatcgtcacgctcagcctggtggagctg
gggctggccaacgtgcaggggctgtcggtgctccgctccttccgtctgctgcgagtcttc
aagctggccaagtcgtggccgacgctcaacatgctcatcaagatcattggcaactcggtg
ggggcgctgggcaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtg
ggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaagatcgccgccgactgc
agcctgccccgctggcacatgtacgacttcttccactccttcctcatcgtcttccgcatc
ctgtgcggggagtggatcgagaccatgtgggactgcatggaggtggccggccaggccatg
tgcctcaccgtcttcctcatggtcatggtcatcggcaaccttgtggtcctgaacctgttc
ctggccctgctcctgagctccttcagtgccgacagcctggctgcctcggacgaggacggc
gagatgaacaacctgcagatcgccatcgctcgcatcaagtggggcatcggcttcgccaag
gccttcatcctggggctcctgcacggcaagatcttgagccccaaggatataatgctcagc
ctcggggagcccgggggcgctgggggtgctggagaggctggggagagcgcccccggggac
gagaagaaggagccgccccctgaggaggaggaggacaaggacctgaagaaggacaaccac
ttcctgaaccacgtgggcctggccgacggccctcccccgggcatcgagctggaccacctc
aacttcatcaacaacccctacctgaccatacaggtgcccatcgcctccgaggagtccgac
ttggagatgcccacggaggaggagaccgacaccttctcagagcccgaggacagcaagaag
ccgctgcagcccccggacgggaactcctccgtctgcagcacggctgactacaagccccct
gaggaggaccccgaagagcaggccgaggagaaccccgacggggagcagcccgaggagtgc
ttcaccgaggcctgtgtgcagcgctgtcccttcctctacgtggacatctcccagggccgc
gggaagcagtggtggaccctgcgcagggcctgcttcaagattgtcgagcacaattggttc
gagaccttcattgtcttcatgatcctgctcagcagtggggccctggccttcgaggacatc
cacatcgagcagcggcgggtcatccgcaccatcctggaatacgccgacaaggtcttcacc
tacatcttcatcgtggaaatgctgctcaagtgggtggcctacggcttcaaggtgtacttc
accaacgcctggtgctggctggacttcctcatcgtggacgtctccatcatcagcctggtg
gccaactggctaggctattcggagctgggacccatcaaatccctgcggacgctgcgggcc
ctgcgtcccctgagggcactttcccgattcgagggcatgagggtagtggtgaacgccctc
ctgggcgccatcccctccatcatgaacgtactgctcgtctgcctcatcttctggctcatc
ttcagcatcatgggcgtgaacctgttcgccggcaaattctactactgcatcaacaccacc
acctccgagaggtttgacgtgtccgaggtgaacaacaagtccgagtgtgagagcctcatg
cacacaggccaagtccgctggctcaacgtcaaggtcaactacgacaacgtgggcttgggc
tacctctccctgctgcaggtggccaccttcaagggttggatggacatcatgtatgcagct
gtggactcccgggagaaggaggagcagccagcttacgaggtgaacctctacatgtacctg
tacttcgtcatcttcatcatcttcgggtccttcttcaccctcaacctcttcatcggtgtc
atcattgacaacttcaaccagcaaaagaaaaagtttggagggaaggacatcttcatgacg
gaggagcagaagaaatactacaacgccatgaagaagctcggggccaaaaagcctcagaag
ccgatcccccggccccagaacaagatccagggcatggtgtacgacctggtgacccagcag
atgttcgacatcatcatcatgatcctcatctgcctcaacatggtcacgatgatggtggag
acggacgaccagagcgagctcaaggtggacatcctctacaacatcaacatggtcttcatc
gtcatcttcacgggcgagtgcgtgctcaagatgctcgcgctgcgccagtactacttcacc
gtcggctggaacatcttcgacttcgtggtcgtcatcctgtccatcgtgggcctggcgctc
tccgacctgatccagaagtacttcgtgtccccgaccctgttccgcgtgatccgcctggcg
cgcatcgggcgcgtgctgcgtctgatccgcggggccaagggcatccggacgctgctcttc
gccctcatgatgtcgctgccagccctcttcaacatcggcctcctgctcttcctggtcatg
ttcatctactccatcttcggcatgtccaacttcgcctacgtcaagaaggagtcgggcatc
gacgacatgttcaacttcgagaccttcggcaacagcatcatctgcctctttgagatcacc
acgtcggccggctgggacgggctgctgaaccccatcctcaacagcgggccgccggactgc
gaccccaccctggagaacccgggcaccagcgtcaggggcgactgcggcaacccctccatc
ggcatctgcttcttctgcagctacatcattatctccttcctcatcgtggtcaacatgtac
atcgccatcatcctggagaacttcaacgtggccaccgaggagagcagcgagccgcttggc
gaggacgacttcgagatgttctacgagacgtgggagaagtttgaccccgacgccacccag
ttcatcgactactgccgcctctccgacttcgtggacacgctacaggagccgctgcggatc
gccaagcccaacaagatcaagctcatcacgctggacctgcccatggtgccgggcgacaag
atccactgcctggacatcctcttcgccctgaccaaggaggtgctgggtgactctggggag
atggacgccctcaaggagaccatggaggagaagttcatggcggccaacccgtccaaggtc
tcctacgagcccatcaccaccaccctcaagcggaagcacgaggaggtgtgtgccatcaag
attcagagggcctaccgccggcacctgctgcagcgctcggtgaagcaggcgtcctacatg
taccgccacggccagaacggtggtggggatggggacgaggctcctgagaaggaggggctg
atcgccgactccatgagcaagatgtacggcccagagaaccgggacagcagtgcgcacagc
caggagcgggagaagggctcccccgaggacgccagccccgccgtggggctccagcccggc
agccccccagacactgagctcctcgccgcccctgctctgcggcagactgtgcgcccaggg
gtcaaagagtctctggtctag
DBGET
integrated database retrieval system
