KEGG   Oryctolagus cuniculus (rabbit): 100351416
Entry
100351416         CDS       T03373                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO beta chain
  KO
K06752  MHC class II antigen
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04514  Cell adhesion molecules
ocu04612  Antigen processing and presentation
ocu04640  Hematopoietic cell lineage
ocu04658  Th1 and Th2 cell differentiation
ocu04659  Th17 cell differentiation
ocu04672  Intestinal immune network for IgA production
ocu04940  Type I diabetes mellitus
ocu05140  Leishmaniasis
ocu05145  Toxoplasmosis
ocu05150  Staphylococcus aureus infection
ocu05152  Tuberculosis
ocu05164  Influenza A
ocu05166  Human T-cell leukemia virus 1 infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05310  Asthma
ocu05320  Autoimmune thyroid disease
ocu05321  Inflammatory bowel disease
ocu05322  Systemic lupus erythematosus
ocu05323  Rheumatoid arthritis
ocu05330  Allograft rejection
ocu05332  Graft-versus-host disease
ocu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100351416
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100351416
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100351416
   04612 Antigen processing and presentation
    100351416
   04658 Th1 and Th2 cell differentiation
    100351416
   04659 Th17 cell differentiation
    100351416
   04672 Intestinal immune network for IgA production
    100351416
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100351416
   05164 Influenza A
    100351416
   05168 Herpes simplex virus 1 infection
    100351416
   05169 Epstein-Barr virus infection
    100351416
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100351416
   05152 Tuberculosis
    100351416
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100351416
   05140 Leishmaniasis
    100351416
  09163 Immune disease
   05310 Asthma
    100351416
   05322 Systemic lupus erythematosus
    100351416
   05323 Rheumatoid arthritis
    100351416
   05320 Autoimmune thyroid disease
    100351416
   05321 Inflammatory bowel disease
    100351416
   05330 Allograft rejection
    100351416
   05332 Graft-versus-host disease
    100351416
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100351416
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100351416
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100351416
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100351416
  Exosomal proteins of epithelial cells
   100351416
  Exosomal proteins of breast milk
   100351416
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 C2-set_2 MHC_I
Other DBs
NCBI-GeneID: 100351416
NCBI-ProteinID: XP_008260980
Ensembl: ENSOCUG00000029437
UniProt: G1SHP0
LinkDB
Position
12:132423231..132429419
AA seq 264 aa
MDSKWVPWVVALLVNLIRLDYSMTQGDSPEDFVIQAKADCYFTNGTEQVRFVVRFIFNLE
EYAHFDSDVGMFVALTELGQPDAESWNNRPDILERSRASVDFLCRRNYRLGAPFTVGRKV
PPEVTVYPERTPVLRQHNLLLCSATGFYPGDIRVRWLRNGQEERAGIMSTGLIRNGDWTF
QTTEMLEMTPELGDVYTCLVDHPSLLSPVSVEWRPQSEYSWAKMLSGVAGFLFGLIFLMV
GTIIHIRAWKGYVETQLSAAAEVS
NT seq 795 nt   +upstreamnt  +downstreamnt
atggattccaagtgggttccctgggtggtggctctgctggtgaatctgatcaggctggat
tactccatgactcaaggagactctccagaagattttgtgattcaggcaaaggctgactgc
tacttcaccaacgggacagagcaggtgcggtttgtggtcaggtttatctttaatttggag
gagtatgcacactttgacagcgacgtggggatgtttgtggcgctgacggagctggggcag
cctgatgctgagtcgtggaacaatcggcccgacatcctggagaggagcagagcgtctgtg
gattttctctgtagacgcaactacaggctgggggctcccttcactgtggggagaaaagtg
ccaccagaggtgacagtgtacccagagaggaccccggtcctgcggcagcacaacctgctg
ctctgctctgcgacgggcttctatccgggggacatcagagtcaggtggctgcggaatggg
caggaggagagagctgggatcatgtccactggccttatcagaaacggagactggaccttt
cagaccacggagatgctggaaatgactcctgagcttggagacgtctacacttgtctcgtg
gatcaccccagcctgctgagccccgtttctgtggagtggaggcctcagtctgaatattct
tgggcaaagatgctaagtggagttgcaggcttcctgtttgggctgatcttccttatggtg
ggaaccatcattcatatcagggcttggaaaggatatgtggagacacagctctctgctgct
gctgaggtctcttag

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