Oryctolagus cuniculus (rabbit): 100354085
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Entry
100354085 CDS
T03373
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100354085
03012 Translation factors [BR:
ocu03012
]
100354085
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100354085
5.6.2.6 RNA 3'-5' helicase
100354085
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100354085
Translation factors [BR:
ocu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100354085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
nSTAND3
AAA_19
ATPase
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
100354085
NCBI-ProteinID:
XP_002723851
Ensembl:
ENSOCUG00000014651
UniProt:
G1TGK9
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MGDVKDFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAIGIAPPLPPLTDMPNNTANAGGLPAIMGGPLPPHLALK
AENNSGVGASGYGAPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWTLEN
AKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQ
SCALSLVRQLYHLGVVEPYSGLTKKKEGETVEPYKVNLSQDLELQLQNTVQELNLEVVPP
PDDPSVPVVLNIGKLAHFEPSQRQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQI
SMDLKNELMYQLEQDQDLQSVLQERTLLPVKKFENEILDAISQNSVVIIRGATGCGKTTQ
VPQFILDDFIQSGRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILP
RPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV
LMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTQFVPPPKDKKKKDKEDDG
GEEDDANCNLICGDEYGPETRMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGW
NLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSI
TINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRA
RFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELD
ALDANDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFINEGKRL
GYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEHKRLNMATLRMTWEAKVQL
KEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNA
LIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQ
IVLVDDWIRLQISHEAAACITALRAAVEALVVEVTKQPSIISQLDPANEHMLNTIRQISR
PSAAGINLMVGSTRYGDGPRPPKMARYDNGSGYRRGGTGYGGGGYGGGYGGSGSYGGGYG
GGGGGGYRGGSRGGFRGGSGGDYRGSGRGGFRGSGGFQRGGGRGGYGGGYFGQGRGGGGY
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgttaaagattttctgtatgcctggtgtggcaaaaggaagatgaccccatcc
tatgaaattagagccgttgggaacaaaaacaggcagaaattcatgtgtgaggtccgagtg
gaaggatacaattacactggcatgggcaattccaccaataagaaggacgcgcagagcaat
gccgccagagactttgttaactatctggtgcgaataaatgaagtcaagagtgaagaagtc
ccggctattgggatcgcacctcctctgcccccactgactgatatgcctaacaatacagcc
aatgctggcggtttaccagcaatcatggggggaccacttcctccacatttggctctcaaa
gcagaaaataattcgggagttggggcatctggctatggtgctcctgggcccacttgggac
aggggagccaacttgaaggactactactcgagaaaggaggaacaagaagtccaggcgact
ctagaatccgaagaggtggatttaaatgctgggcttcatggaaactggaccttggaaaat
gctaaggctcgtctgaaccagtatttccagaaggaaaagatccagggagaatataagtac
acccaagtgggtcctgatcacaacaggagctttattgcagaaatgaccatttatatcaag
cagctgggcagaaggatttttgcacgtgaacacggatcaaataagaaattggcagcacag
tcctgtgccctgtctcttgtcagacagctctatcatcttggagtggtggaaccttactct
gggcttacaaagaagaaagaaggagagacagtggagccttacaaagtgaacctctctcaa
gatttagaacttcagctgcaaaacacagttcaagagctgaatcttgaagttgtgcccccg
cctgatgacccttctgtgccagtggttctcaacattggcaaattggctcactttgaacca
tctcagcgacaaaaccaagtgggtgtggttccttggtctcctccacagtcaaattggaat
ccttggactagcagcaacattgacgaggggcccctggcctatgccactccagaacaaata
agcatggaccttaagaatgagttaatgtaccagctggagcaggatcaggacttacagtca
gtcttgcaggagagaacgttgctgcctgtgaagaagtttgaaaatgaaatcctggatgca
attagtcaaaattcagttgtcatcatccgaggggccacgggatgtggcaaaaccacacag
gttccccagttcattctagatgactttatccagagtggccgggcagcagaatgtaacatt
gtggtaacccagcccaggaggatcagcgcggtgtccgtggcagaacgcgttgcctatgag
cgaggggaggagcctgggaagagctgtggctacagtgtgcgatttgagtccattcttccc
cgccctcatgccagcatcatgttttgtactgtgggtgtgctcctaaggaaattagaagca
ggcattcgaggaatcagtcatgtaattgtggatgaaatacacgagcgagacataaatact
gacttccttttggtagtactgcgtgatgtggttcaggcttatcctgaagttcgcattgtt
ctcatgtctgctactattgataccagcatgttctgtgaatatttcttcaattgcccaatc
attgaagtttatgggaggacttacccagttcaagagtattttctggaagactgcattcag
atgactcagtttgtgccacctccaaaggacaaaaagaagaaggataaggaggatgatggt
ggtgaagaggatgatgcaaactgcaacctgatttgtggtgatgagtatggtccagaaaca
aggatgagcatggcccagttgaatgagaaggaaacccccttcgagctcatcgaagctctg
ctgaagtacattgagactctcaatgttccaggagctgtactggtgtttttgcccggctgg
aatttaatttatactatgcagaagcatttggagatgaacgcacattttgggagccacagg
tatcagatactgcctctgcactcccagatcccgcgagaggagcagcgcaaagtgtttgat
cccgtgccagttggagtaaccaaggttattttatccacaaatattgctgaaacaagcatc
accattaacgacgttgtttatgtcatcgactcctgcaagcagaaagtgaaactgttcact
gctcacaacaacatgaccaactatgccacggtgtgggcgtccaaaacaaaccttgagcag
cggaaagggcgagctggccgtgtgcggcctggattctgctttcacctctgtagccgagct
cgttttgagagactggaaacccacatgacaccagagatgttccggacaccactgcatgaa
attgccttgagcatcaagcttctgcgtctcggaggaatcggccagtttctggctaaggcg
atagagcccccgcccctggacgctgtgattgaagcggagcacactctgagagagctggac
gcactagatgccaatgatgagttgactcctctgggacggatcctagctaaactccctatt
gagcctcgtcttggcaaaatgatgatcatggggtgtattttctatgtgggagacgctgtc
tgcaccatctctgctgctacctgcttcccagagcctttcatcaacgaaggaaagcggctc
ggctacatccatcggaattttgctgggaacagattctctgatcacgtggccctgttatcg
gtattccaagcctgggatgatgccagaatgagtggagaagaagcagagatacgtttttgt
gaacacaaaagactcaatatggctacactgagaatgacttgggaagccaaagttcagctt
aaagagattctgattaattctggatttccagaagattgtttgttgacacaagtgtttact
aacactggaccagataataacttggatgttgttatctctctcctggcctttggtgtgtat
cccaatgtgtgctatcacaaggaaaagagaaagattcttaccaccgaagggcgcaatgca
cttatccacaaatcgtctgttaattgtccttttagcagccaagacatgaaatacccttcc
cccttctttgtatttggtgaaaagattcgaacccgcgccatctctgctaaaggcatgact
ttagtcactcccctgcagttgcttctttttgcctccaagaaagtccaatctgatggtcag
attgtgctggtagatgactggatcagactgcaaataagccatgaagctgctgcctgcatc
actgctctgcgggctgcagtggaggctcttgttgttgaagtgaccaagcagcccagtatc
atcagccagctggaccctgccaatgagcacatgctgaacaccatccgccagatctccagg
ccctcagctgctggcatcaacctgatggttggcagtacacggtatggagatggtccacgt
cctcccaagatggcgcgctatgacaatgggagtggctatagaaggggtggcactggctat
ggcggtggaggctatggcggcggctatggtggctcaggctcctatgggggagggtatggc
ggaggtggaggtgggggctacagaggaggttcccgggggggctttagaggtggatctggg
ggggactacagagggtctggtagagggggcttccgaggatctgggggtttccagcgagga
ggtggcagggggggctatggaggtggttactttggacaaggaagaggtggtggcggctat
taa
DBGET
integrated database retrieval system
