Oryctolagus cuniculus (rabbit): 100355877
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Entry
100355877 CDS
T03373
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu00310
Lysine degradation
ocu01100
Metabolic pathways
ocu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100355877
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100355877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100355877
Enzymes [BR:
ocu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100355877
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100355877
Heterochromatin formation proteins
Other heterochromatin formation proteins
100355877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
100355877
NCBI-ProteinID:
XP_002715622
Ensembl:
ENSOCUG00000003642
UniProt:
G1T430
LinkDB
All DBs
Position
13:complement(41477516..41508276)
Genome browser
AA seq
1292 aa
AA seq
DB search
MASLPGCIGLGAAAAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQFRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPIPPTSPLSPQAGDAESLES
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSESAPGGKPAVNQTYRSPLGSSASAPA
PPAPPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRNEQYR
GKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFL
EMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGK
GVFINTGPEFLVGCDCKDGCRDKSKCVCHQLTIQATACTPGGQINPNSGYQYKRLEECLP
TGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGK
ILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGT
EDAEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMAAKDSRPPDLGPP
HMPVPPSVPVGVCNPPSSEETPKNKVASWLSCNSISDGAFDSDSRSSFKTGEGSAGGGRG
EAEKATASALGIKDEGDVKQTKKEEPDDRSKTSGATESSRNYGYNPSPMKPEGLRRPPSK
TNLHQSRRLMASAQANTDDVLTLSSSTESEGESGTSRKPTAGQTAATAVDSDDIQTISSG
SEGDDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGDSAPVRKNTRQ
FYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGT
ELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcatccctgcctgggtgtattggcttgggtgcagccgcagccgcagtggagtcggaa
gagattgcagagctgcagcaagcagtggttgaagagctgggtatctccatggaggaactc
cggcagttcattgatgaagaactggagaagatggactgtgtccagcagcgcaagaagcag
ctagccgagttggagacgtgggtaatacagaaagagtctgaggtggctcatgttgaccag
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacaatatcgagacagtagctctgaagacgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtccttagtattgattcaggtgatgct
gggagcagaactcctaaagatcagaagctccgtgaagctatggctgctttaagaaaatca
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcagatgtcgggtgaactgagcaaagatggtgacctgatagtc
agcatgcggattctgggcaagaagaggaccaagacgtggcacaaaggcaccctgattgcc
atccagacggtcgggccagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtcagggaaccatattgcctatgattaccaccctcccgctgacaagctgttcgtg
ggcagtcgagtggtggccaagtacaaagatgggaaccaggtctggctctatgctggcatt
gtagccgaaacaccaaacgtcaaaaacaagctcaggtttctcattttcttcgatgatggc
tacgcatcctatgtcacacagtctgaactgtatcccatttgccggccattgaagaagact
tgggaggacatagaagacgtctcctgccgagacttcatagaggagtatatcactgcctac
cccaaccgacccatggtgctgctcaagagtggacagcttatcaagactgagtgggagggc
acatggtggaagtcacgagttgaggaagtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggctctacacggctggagcccatgtttagc
atgaagacatcttcggcctctgcactggaaaaaaagcaagggggacagttcaggacacgt
ccaaatatgggtgcggtgagaagtaaaggccctgttgtccagtatacacaggatctgacc
agtactgggacccaattcaagccaatggagcccccacagcctacagccccacctgcccca
cccatcccacctacttcacctctgtcgcctcaagcaggtgacgctgaaagcttggaaagc
cagcttgctcaatcacggaagcaggtagccaaaaagagcacatcctttcgaccaggatct
gtgggctctggtcattcctcccctacatcccctgcactcagtgaaagtgcccctggtggg
aaacctgcagtcaaccagacgtataggtcacctttaggttcatcagcctctgccccagca
cccccggctcctccagcacccccagcacccccagcacccccagccttccatggtatgctg
gagcgggcccctgcagagccctcctaccgtgcccccatggagaagcttttctacttacct
cacgtctgcagctatacttgtctgtctcggatcagacctatgaggaatgagcagtaccgg
ggcaagaaccctctgctggtcccactactgtacgacttccggcgaatgacagcccggcgc
cgggttaatcgcaaaatgggctttcatgttatctataagacaccctgcggcctctgcctt
cggacaatgcaggagattgaacgctacctttttgagactggctgtgacttcctctttctg
gagatgttctgtttagatccatatgttcttgtggaccggaagtttcagccctataaacct
ttttactatatcttggacatcacctacgggaaggaagatgttcccctatcctgtgtcaat
gagattgacacaactcctccaccacaggtggcctacagcaaggaacggatccctggcaag
ggtgttttcattaacacgggccctgagtttctggtcggctgcgactgcaaggatgggtgt
cgggacaagtctaagtgtgtctgccatcagctaactatccaggctactgcttgtacccca
gggggtcagatcaaccctaactctggctaccagtacaagagactagaagagtgtctgccc
acaggggtatatgagtgtaacaaacgctgcaaatgtgacccaaacatgtgcacaaaccgg
ttggtgcagcatggactacaggttcgcctacagctattcaagacacagaacaagggctgg
ggtatccgctgcttggatgacattgccaaaggctcttttgtttgtatttatgcaggcaag
atcctgacagatgactttgcagacaaggaaggcttggaaatgggtgatgaatactttgca
aatctggaccatatcgagagcgtggagaacttcaaggaaggatatgagagtgatgccccc
tgttcctctgacagcagtggtgtagacttaaaggaccaggaagatggtaacagtggtaca
gaggatgctgaggagtccaatgatgatagctcagatgacaacttctgtaaggatgaggac
ttcagcaccagctcagtgtggcgcagctatgctacccggaggcagacccgaggccagaag
gaaaatggactgtctgagatggctgccaaagactcccgtcccccagaccttgggccacca
catatgcctgtccctccctcagtccctgtaggtgtctgcaacccaccttcctccgaggag
acacccaagaacaaggtggcctcgtggctgagctgcaatagtatcagtgacggtgctttt
gactctgatagccgctcctccttcaagactggtgaaggtagcgctgggggaggccgaggg
gaagctgagaaagccaccgcctcggcactgggcatcaaggacgagggggacgtcaagcag
accaagaaggaggaacctgatgaccgaagcaagacatcaggagctactgaaagctctaga
aattatggttacaatccttctcccatgaagccagaaggacttcgccgcccaccgagtaag
acaaatctacatcagagccgacgactcatggcctctgctcaggccaacactgatgatgtt
ctgacactgtccagcagcacagagagtgagggggaaagtgggaccagccggaagcccacc
gctggtcagactgcagccacggcggttgacagtgatgacatccagaccatctcctccggc
tccgaaggagatgactttgaggacaaaaagaacatgtctggtccaaccaagcgccaggtg
gcagtaaagtcaacccggggctttgctcttaaatcaacccatgggattgctattaagtca
accaacatggcctctgtggagaagggagatagcgccccagttcgtaagaacacacgccag
ttctacgatggtgaggagtcttgttacatcattgacgccaagcttgaaggcaacctgggc
cgctacctcaatcacagttgcagccccaacctgtttgtccagaatgtcttcgtggacacc
catgatcttcgcttcccttgggtggccttctttgccagcaagagaatccgggctgggacg
gaactgacgtgggactacaactacgaggtgggcagtgtggaaggcaaggagctgctctgc
tgctgtggcgccatcgaatgcagagggcgtcttctctag
DBGET
integrated database retrieval system
