Oryctolagus cuniculus (rabbit): 100355930
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Entry
100355930 CDS
T03373
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100355930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100355930
Enzymes [BR:
ocu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
100355930
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100355930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
100355930
NCBI-ProteinID:
XP_051701801
Ensembl:
ENSOCUG00000016313
LinkDB
All DBs
Position
4:90631248..90651113
Genome browser
AA seq
406 aa
AA seq
DB search
MEAENAGSYSLQQAQAFYTFPFQQMMAEAPDMPIVNEQQMPAEVAAPAPAEEPVQEAPKG
RKRKTRATEPKKPAEPKKPAEAKKSGKSAKSKEKQEKITDAFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSR
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVRYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYSDNPCNSEPCSFPS
NGLAADSAELRESALNAIPDGQWMAQPFTDQIPSLNNHCGAQEQGV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagaacgcgggcagctattcccttcagcaggctcaggctttttatacgttt
ccctttcaacaaatgatggccgaggctcccgatatgccgattgtgaacgaacagcaaatg
cccgcagaagtcgcagcccccgctcctgctgaggaacctgtacaagaggctccaaaagga
agaaaaagaaaaactcgagcaacagaacccaaaaaaccagcagaacccaaaaaacctgct
gaggcaaaaaaatctggcaaatctgccaagtcaaaggaaaagcaagaaaaaattacagat
gcgtttaaggtgaaaaggaaagtggaccgttttaatggcgtgtcagaggctgaacttctg
accaagactctccctgatattttgaccttcaacctggacattgtaattattggcataaat
ccaggactaatggctgcttacaaaggacatcattaccctggacctggaaaccatttttgg
aagtgtctgttcatgtcagggctgagtgaggtccagctgaaccacatggacgatcacact
ttacctgggaagtatggcattggatttaccaatatggtggagaggacgacgccaggcagc
aaggatctttccagtaaagaatttcgtgaaggaggacgtattctagtccagaaattacag
aaatatcagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaga
gaagtttttggagtaaaggttaagaacttggaatttgggcttcaaccccacaagattcca
gacacagaaactctctgctatgtgatgccatcatccagtgcaaggtgtgctcagtttcct
cgcgctcaggacaaagttcattactacattaagttgaaggacttaagagatcagttgaaa
ggcattgaacgaaacacagacgttcaagaagtgcggtatacatttgacctacagcttgcc
caagaggatgcaaagaagatggctgttaaggaagaaaaatacgatcctggttatgaagca
gcctacggtggtgcttacagtgacaacccgtgcaatagtgaaccttgcagcttcccgtct
aatgggctagctgcggacagtgcggagttaagagaatcagctctcaatgccattccagat
gggcagtggatggcccagccgtttacagaccagattccttccctgaacaatcactgtgga
gcgcaagagcagggtgtctaa
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