Oryctolagus cuniculus (rabbit): 100356594
Help
Entry
100356594 CDS
T03373
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04621
NOD-like receptor signaling pathway
ocu04668
TNF signaling pathway
ocu05152
Tuberculosis
ocu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100356594
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100356594
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100356594
09163 Immune disease
05321 Inflammatory bowel disease
100356594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocu04054
]
100356594
Pattern recognition receptors [BR:
ocu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100356594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
NOD2_WH
LRR_4
LRR_8
AAA_16
AAA_29
NB-ARC
AAA_25
AAA_30
AAA_22
G-alpha
ABC_tran
DAP3
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100356594
NCBI-ProteinID:
XP_008273264
Ensembl:
ENSOCUG00000012840
UniProt:
G1T469
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:7173916..7215042
Genome browser
AA seq
1013 aa
AA seq
DB search
MCSQEAFQAQRSQLVGLLVSGSLEGFESILDLLLSWEVLSWEDYEGLRLVGQPLSHLARR
LLDTVWNKGTWGCQKLIAAVQEAQDSSQCPELHGCWDPHSLHPAQDLQSHRPAIVRRLYS
HVEGVLDLALEQGFISQYECDEIRLPIFTSSQRARRLLDLATVKANGLAAFLLQHVQKLP
VSLSLPFEAAACKKYMSKLRTIVAAQSRFLSTYDGAENLCLEDIYTENTLEVRTEVGMAG
PLHKSPAALGLEELFSPNGHLNEDADTVLVVGEAGSGKSTLLQQVHLLWATGQDFQEFLF
VFPFSCRQLQCVARPLSVMTLLFEHCCWPDVGQQDVFQFLLDHPDRILLTFDGFDEFKFK
FTDHERHCSPTDPTSVQTLLFNLLQGNLLKNARKVLTSRPDAVSAFLRKYVRTEFNLKGF
SEEGIELYLRKCHREPGVADRLIHLLQTTSALHGLCHLPVFSWMVSKCHQELLLQDGGSP
KTTTDMYLLILQHFLRHASLPDSASQGLGPSLLQGRLPTLLRLGQLALWGLGMCCYVFSA
QQLQAAQVDPDDISLGFLVQAQGVVPGSTAPLEFLHITFQCFLAAFYLVLSTDVPTASLR
YLFNCRRPGSSPLSRLLPRLCVQGSEHKESTVAALLQKTEPHNLQITAAFLAGLLSREHR
DLLAACQASERSLLRRRACARWCLARSLHKHFRSIPPAVPGEAKSMHAMPGFLWLIRSLY
EMQEERLAQEAVRGLNVEHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDIGV
EQLLPCLGACKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLL
ACKQNFLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQ
SLKWLSLVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKV
LKLSNNCITFVGAEALLQALASNDTILEVWLRGNPFSPEEMEALSHRDSRLLL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctcaagaggctttccaggcacagaggagccagctggtggggctgctggtttcg
gggtccctggagggcttcgagagcatcctggacttgctgctgtcatgggaagttctctcc
tgggaggactatgagggcctccgcctcgtgggccagcctctgtcccacttggccaggcgc
ctcctggacactgtctggaataaaggcacttggggctgtcagaagctcatcgcagctgtc
caggaggcccaggacagcagccagtgccctgagctgcatggctgctgggacccccactca
ctccacccagcccaggacctgcagagtcaccggccagccatcgtcaggagactgtacagc
cacgtggagggcgtgctggacctggcgctggagcagggcttcatcagccagtacgaatgt
gatgaaatcaggctgcccatcttcacgtcatcccagagggcaagaaggctgctcgatctt
gccacagtgaaggcaaatgggctggctgccttccttctgcaacatgttcagaagttgccg
gtctcactgtccctgccctttgaagctgccgcgtgtaagaagtacatgtccaagctgcgg
accatagtagctgcacagtctcgcttcctcagcacctatgatggagcagagaacctctgc
ctggaggacatatacacagagaacaccctggaggtccggaccgaggtgggcatggctgga
cccctgcacaagagccccgccgccctgggcctggaggagctcttcagccccaacggccac
cttaatgaagatgcggacaccgtgctcgtggtgggcgaggcaggcagtggcaagagcaca
ctcctacagcaggtgcacttgctgtgggccacggggcaggactttcaggaatttctcttt
gtcttcccattcagctgccggcagctgcagtgtgtggccagaccgctgtctgtaatgacg
ctgctctttgaacattgctgctggcccgatgttggccaacaggatgtcttccagttcctc
ctggaccaccctgaccgcatcctcttgacctttgacggctttgatgagttcaagttcaag
ttcacggaccatgagcgtcactgctctccaactgaccccacgtctgtccagactctgctc
ttcaaccttctgcaaggcaacctcctaaagaacgcccgcaaggtgctgaccagccgtccg
gatgcggtgtcagcgttccttaggaagtatgtccgcactgagttcaacctcaagggcttc
tcagaggagggcatcgagctgtacctgaggaagtgccatcgtgagcctggggtggcagat
cgcctcatccacctgctccaaacaacttcagccctgcatggtttgtgtcaccttcctgtc
ttctcgtggatggtgtctaaatgccaccaggaactgttgctgcaggacggggggtcccca
aagaccaccacggatatgtacctgctgatcttgcagcatttcctgcggcatgcctccctc
ccagactcagcctcccagggcctggggcccagcctccttcaaggaaggctccccaccctc
ctgcgcctcggccaactggctctctggggcctgggcatgtgctgctacgtgttctcagcc
cagcagctccaggcagcgcaggttgaccctgatgacatttctctgggcttcctggtgcaa
gcccaaggcgtcgtgccgggaagcacagcgcccctcgaattcctgcacattactttccag
tgctttcttgctgccttctacttggtactcagcactgatgtgccaacagcctccctcaga
tacctcttcaactgtcgcaggcctggcagctcgccgctgtccaggctgctgcccaggctg
tgcgtccagggctcggagcacaaggaaagcaccgtggcggctttgctacagaagactgag
ccgcacaaccttcagatcacagcagccttcctggctggcctgttgtcccgggagcaccgg
gacctgctggctgcgtgccaggcatctgagaggagcttgctccggcgccgggcctgtgcc
cgctggtgtctggcccgcagcctccacaagcacttccggtccatcccaccagccgtgccg
ggggaggccaagagcatgcacgccatgcccgggttcctctggctcatccggagcctgtac
gagatgcaggaggaacggctggcccaggaggctgtgcgcgggctgaatgttgagcacctc
aagctgacgttttgtggcgtgggccctgctgagtgtgccgccctggccttcgtgctgcgc
cacctccggcggcctgtggccctgcagctggaccacaactccgtgggtgacattggtgtg
gagcagctgctgccttgcctcggggcttgcaaggccctctatctgcgagataacaatatc
tcagaccgaggcatttgcaagctcatcgaacatgctcttcactgtgaacaactgcagaag
ttggctctgttcaacaacaagctgaccgatggctgtgcccactccgtggcccagctcctt
gcgtgcaagcagaacttcttggcattgaggctggggaataaccacatcaccgctgaagga
gcccaggtgctggccgaggggctccgagacaacagctccttgcagttcctggggttctgg
ggcaacaaagtgggtgacaagggggcccaggccctggcagaagccttgagtgaccatcaa
agcttgaaatggctcagcctggtggggaacaacattggcagtgtgggtgcccaggcctta
gcatcgatgctggagaagaacgtggcactagaagaactctgcctggaagagaaccatctc
caggatgcaggtgtgtgttctctcgcagaaggactaaagaggaattcaagtttgaaagtc
ttgaagctgtccaacaattgcatcacctttgtgggggcagaagccctcctgcaggccctg
gcaagcaatgacaccatcctggaagtctggctccgcgggaaccctttctctccagaggaa
atggaggcgctcagccacagggacagcagactcttgctgtga
DBGET
integrated database retrieval system
