Oryctolagus cuniculus (rabbit): 100356680
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Entry
100356680 CDS
T03373
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100356680 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocu01007
]
100356680 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocu03016
]
100356680 (IARS1)
Enzymes [BR:
ocu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
100356680 (IARS1)
Amino acid related enzymes [BR:
ocu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100356680 (IARS1)
Transfer RNA biogenesis [BR:
ocu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100356680 (IARS1)
Prokaryotic type
Other AARSs
100356680 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
100356680
NCBI-ProteinID:
XP_051715078
Ensembl:
ENSOCUG00000016888
UniProt:
G1TCK9
LinkDB
All DBs
Position
1:complement(84091237..84180122)
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPAEEEKILQFWSEFNCFQECLKQSKHRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNQC
RAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDKNICLVAWTTTPWTLPSNLALCVNP
DLQYVKIKDVARGKLLILMEARLSALYKSESDYEILERFPGSYLKGKKYMPLFDYFVKYK
ENGAFTVLVDHYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSLPICPVDASGCFTA
EVTHFAGQYVKDADKNIIRTLKEWDRLLMASTFTHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDQLLRNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSVAELEELSGAKVSDLHRESIDHLTIPSHCGKGRLHRISEVFDCWFESGSMPYAQVHY
PFETKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPVSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVLRLQKEEEKEFLYNESTIKESPNITDRWILSFMQSLVGFFETEMAAYRLYTVV
PRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVLFSLCRLMAPYTPFLTELM
YQNLKMLIDPVSVQDKDTLSIHYLMLPRVREELIDKKTENAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALKDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKTVMTSIKQLSDEELQQFQKSGTIVVEGHELHEEDIRLMYTFDQATGGTAQ
FEAHSDAQALVLLDISPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKATSEGR
YLNNVIESHTEFIFATIKAPLKPYPVSTSEKILIQEKTQLKGSELEITLTKGSSLSGPAC
AYVNLSICANGNEQGGVLLLENPKGENRLDLLKLKSVVTSIFGVKTTELAVFHGGTEIQH
QTDLLSLSGKTLHVTAGSAPSLVNSPSTLLCQYINLQLLNAEPQECLMGTVGTLLLENPL
GQNGLTHQGLLYEAAKVFGLRSRKLKLFLNETQTDEITEDIPMKSLNMKTVYVSVLPTTA
EF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacatcaattttcctgctgaagaagagaaaattttgcag
ttctggtctgaatttaattgttttcaggaatgcttaaagcaatcaaaacacaggccaaaa
tttaccttctatgatgggcctccttttgcaactggactgcctcactatggacatatactt
gcagggacaattaaagatatagttacaagatatgctcaccagagtgggtttcacgttgac
agaagatttggatgggattgtcatggtttacctgtggaatatgaaattgataagacactg
gggatcaaaggaccagaggatgttgccaaaatgggtattgcagagtataacaatcagtgc
cgagcaattgtgatgagatactctacagagtggaagtctactgtcaccagacttggccga
tggattgactttgacaatgactacaaaactctgtatccacaatttatggaatctgtctgg
tgggtcttcaaacagctctatgataaaggccttgtttatagaggtgtgaaagtcatgccc
ttctccactgcatgcaacactccactttccaacttcgaatcacaccagaattacaaggat
gttcaagatccttcagtatttgtaactttccctttggaggaagataaaaatatatgttta
gttgcttggacaaccactccctggactttacctagtaacctcgcactttgtgttaaccca
gatttgcaatatgtgaagattaaagatgttgcaagaggaaaattactcattttaatggaa
gccagattatcagccctctacaaatcggagagtgactatgagatccttgaaaggtttcct
ggttcttatctcaagggcaagaaatacatgcctctgttcgactattttgtgaagtataaa
gaaaatggtgctttcactgtgctcgttgaccactatgtgaaggaggaagaaggcacgggc
gtggtacaccaggctccttacttcggcgctgatgactatcgggtgtgtatggacttcaac
attattcagaaagattcactccctatttgccctgtggatgcatcaggctgcttcacagca
gaagtgacacattttgcaggacaatatgttaaggatgctgacaaaaatatcatcaggacc
ttgaaggaatgggaccgacttcttatggccagcaccttcactcacagctaccctttctgc
tggaggtcggacacacccctcatttacaaggcagtgcccagctggtttgtacgagtagag
cacatggtggaccagctcctgaggaacaatgacctgtgttactgggtcccagagtttgtg
cgagaaaagcgatttggaaattggctgaaagatgcccgtgactgggcaatttccagaaac
agatactggggtacccccatcccactttgggtcagcgatgactttgaggaggtagtatgc
attggatcagtggcggaacttgaagaactttcgggagcaaaagtttcagatctccacaga
gagagcattgaccacctgaccattccgtcacactgcgggaagggacggttgcatcgcatc
tctgaagtatttgactgctggtttgagagtggaagcatgccctatgctcaggttcattac
ccattcgaaaccaagagggagtttgaagactcctttcctgcagacttcattgctgaaggc
atcgaccaaaccagaggatggttttacaccctgctggtgctggccacggccctgtttgga
caaccgcctttcaagaacgtgattgtgaacgggctcgtcctggcgagtgatggccagaaa
atgagcaaacgaaaaaagaattatccagatccagtttcgatcatccataagtatggtgct
gatgccctcagattatatctgataaactcccctgtggtgagagccgaaaatctccgcttc
aaggaggagggcgtgcgggacgtccttaaggatgtgctgctgccctggtacaatgcgtat
cggttcttcattcagaacgtcctgagacttcagaaggaagaagaaaaggaattcctctac
aatgagagcacaatcaaagaaagccccaacatcacagaccggtggatcctgtccttcatg
cagtccctcgtgggcttctttgagactgaaatggcagcctataggctttataccgtggta
cctcgcctggtcaagtttgtggatattctgaccaattggtatgtcaggatgaaccgcaga
agattaaagggtgaaaatgggatggaggattgtgttatggccctagagactttgtttagt
gtcctgttttctctgtgcagactgatggccccctatacaccgtttctcaccgaattgatg
taccagaatctaaagatgctgattgatccagtttctgtccaggataaggacacactcagc
atccactacctcatgctgcctcgtgttcgagaggaattgattgacaagaaaaccgagaat
gcagtgtccagaatgcagtctgtgattgaacttgggcgagtgatccgagatcgcaaaacc
atcccaataaagtatcctttgaaagaaattgtggtcatccatcaagatccagaagctctc
aaagatattaagtctttggagaagtacatcattgaggaattgaatgttcgaaaagtcaca
ctgtctacagataaaaacaagtatggcattcggctaagggcagaaccagatcacatggtc
ttggggaagcgcctaaagggagcctttaaaaccgtgatgacatccatcaagcagctgagc
gatgaggagctccagcagttccagaagagcggcaccattgttgtggaaggccatgagttg
catgaggaagacatccgcctcatgtatacctttgatcaggccacaggtgggactgcacag
tttgaagcacactcggatgctcaggctttggttctcttagacatcagccctgatcagtca
atggtagatgagggaatggcccgggaagtcatcaatcgtatccagaaacttcgcaaaaag
tgcaatctggttcccacagatgaaataacagtttattataaagcaacatctgaaggaagg
tatttgaataatgttattgaaagccacacagagtttatatttgccaccataaaggctccc
ttgaaaccatatccagtttctacatcggaaaaaattcttattcaagaaaaaacacagtta
aagggatctgagctggaaattacactcaccaaaggatcatccctgtctggccctgcttgt
gcatatgtcaatcttagcatttgcgcaaatggcaatgagcaaggtggagtattgcttctg
gaaaatccaaaaggtgaaaacagattggaccttttaaagctaaagagtgttgttactagc
atttttggtgttaaaactacagaactggctgtcttccatggtggaacagaaatacaacac
caaactgacttactgagccttagcggaaaaacactccacgtgacagcaggatcagctcct
tctctggtcaacagccctagcactcttctatgccagtatatcaacctgcagctcctgaac
gcagagccacaagagtgtttaatgggaacagtgggcactctgctccttgaaaaccctctt
ggacaaaatggactcacccatcaaggtcttctctacgaagcagccaaggtgtttggcctc
cggagcaggaagctgaagctgtttctcaacgagactcaaacagatgaaattactgaagac
atccccatgaagagtttgaatatgaagacagtgtatgtttccgtattgccaacaacagca
gaattctaa
DBGET
integrated database retrieval system
