Ochotona curzoniae (black-lipped pika): 121146977
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Entry
121146977 CDS
T11174
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
ocz05017
Spinocerebellar ataxia
ocz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121146977 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
121146977 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
121146977 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocz04040
]
121146977 (TRPC3)
Ion channels [BR:
ocz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121146977 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
121146977
NCBI-ProteinID:
XP_040822506
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEDEGEDEGAEPQRRRRGWRGVNGGLEPRSAPLRREPHG
FCPPPFSPGPDLSMEGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAA
EYGNIPVVRKMLEESTTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALL
LAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILA
AHCQKYEVVHMLLLKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYL
SLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAIL
NGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVA
IKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDR
FEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQ
LWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARD
KWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMV
FLAFMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIG
YVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPF
SLVPSPKSFVYFFMRIINFSKCRRRRLQKDLEMGMGNSKSRLNLFTQSNSRVFESHSFNS
ILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATE
ELAILIHKLSEKLNPSVLRCE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggaacaagcgagggtgaccttccccgctcccgag
gaggaggaagatgagggcgaggacgaaggagcggagccgcagcgtcgccgccgcggctgg
aggggcgtcaacggggggctggagccgcgctcggcgcccttgcggcgggagccacacggc
ttctgcccacctcccttctccccgggacccgacctgtccatggagggaagcccgtcctta
agacgtatgacggtgatgcgggagaagggccggcgccaggccgtgaggggcccggccttc
atgttcaacgaccgaggcaccagcctcaccgctgaggaggagcgcttcctggatgccgcc
gagtatggcaacatccccgtagtgcgcaaaatgctagaagaatccaccacgctgaacgtc
aactgcgtggactacatgggccagaacgcactgcagctggcagtgggcaatgagcacctg
gaggtgaccgagctgctactcaaaaaggagaacctggcgcgcattggcgacgccctgctg
ctcgccatcagcaagggctacgtgcgcatcgtggaggccatcctcaaccacccgggcttc
gcggccagcaaacgcctgaccctgagcccgtgcgagcaggagctgcaggacgacgacttc
tacgcctacgacgaggacggcacacgcttctcgcccgacatcacccccatcatcctggcg
gctcactgccagaagtacgaggtggtgcacatgctgctgctcaagggcgccaggatcgag
cggcctcacgattacttctgcaagtgtggggactgcaccgagaagcagaggcacgactcc
ttcagccactcgcgctccaggatcaacgcctacaaggggctggccagcccggcgtacctg
tccttgtccagtgaggacccggtgcttactgccctggagctcagcaatgagctggccaaa
ctagccaacatcgagaaggaattcaagaatgactaccggaagctctccatgcaatgcaaa
gactttgtagtaggtgtgctggatctctgccgagactcagaggaggtcgaagccattctg
aatggagatctggagtcagcagagcctctggaggttcacaggcataaagcttcattgagt
cgtgtcaaacttgccattaagtacgaagtcaaaaagtttgtggctcaccccaactgccag
cagcagcttctgaccatctggtatgagaatctctcgggtctacgggaacagactgtggcc
atcaagtgtctggttgtgctagttgtggctttgggtctcccattcctcgccatcggctac
tggatcgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagtttgta
gcacatgctgcttctttcatcatcttcctgggcctgcttgtgttcaatgcctcagacagg
tttgaaggcatcaccacactgccaaatatcacagttattgactatcccaagcagatcttc
agggtgaaaaccacccagttcacatggactgaaatgctcattatggtctgggttctcggg
atgatgtggtctgagtgcaaggagctgtggctggaagggcctcgggagtacatcttgcag
ctgtggaacgtgcttgactttgggatgctctctatcttcattgctgcattcacggccaga
tttctggctttcctgcaggcaaccaaagcacagcagtatgtggacagctatgtccaggag
agtgacctcagcgaagttaccctccctccagagattcagtacttcacctatgctagagat
aagtggctcccttctgaccctcagatcatatcggaaggcctttacgccatagcagttgtg
ctcagcttctctcggatcgcttacatcctgcctgcaaacgagagctttggccccttacag
atctctcttggaaggactgtaaaggacattttcaagttcatggtcctttttattatggtg
tttctggcctttatgattggcatgttcatactttactcttactatcttggggctaaagta
aatcctgcttttaccactgtagaagaaagtttcaagactttgttttggtcaatatttggg
ttgtctgaagtgacttctgttgtgctcaaatatgatcacaaattcatagagaatattgga
tatgttctgtatggaatatacaatgtgactatggtggttgttttactcaacatgctaatt
gcaatgatcaacagctcctatcaagaaattgaggatgacagcgatgtggagtggaagttt
gcccgttccaaactttggttgtcctatttcgatgatgggaaaaccttacctccacccttc
agcctagttcctagtccaaagtcgtttgtttatttcttcatgaggatcattaacttttct
aaatgcagaaggagaaggctacagaaggatctagaaatgggaatgggtaactcgaagtcc
aggttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagc
attctcaatcagccaacacgttatcagcaaataatgaaaagacttataaaacgatatgtt
ttgaaagcacaagtagataaagaaaatgatgaagttaatgaaggtgaattgaaggagatc
aagcaagatatctccagccttcgttatgaacttttggaagacaagagccaagcaactgag
gaattagccattctgattcataaactcagtgagaaactgaaccccagcgtgttgagatgt
gaatga
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