KEGG   Ochotona curzoniae (black-lipped pika): 121149781
Entry
121149781         CDS       T11174                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04060  Cytokine-cytokine receptor interaction
ocz04061  Viral protein interaction with cytokine and cytokine receptor
ocz04062  Chemokine signaling pathway
ocz04064  NF-kappa B signaling pathway
ocz04360  Axon guidance
ocz04670  Leukocyte transendothelial migration
ocz04672  Intestinal immune network for IgA production
ocz04810  Regulation of actin cytoskeleton
ocz05163  Human cytomegalovirus infection
ocz05200  Pathways in cancer
ocz05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    121149781 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121149781 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    121149781 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121149781 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    121149781 (CXCL12)
   04672 Intestinal immune network for IgA production
    121149781 (CXCL12)
   04062 Chemokine signaling pathway
    121149781 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    121149781 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121149781 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    121149781 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    121149781 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocz04052]
    121149781 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:ocz00536]
    121149781 (CXCL12)
Cytokines and neuropeptides [BR:ocz04052]
 Cytokines
  Chemokines
   121149781 (CXCL12)
Glycosaminoglycan binding proteins [BR:ocz00536]
 Heparan sulfate / Heparin
  Chemokines
   121149781 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 121149781
NCBI-ProteinID: XP_040826302
LinkDB
Position
Unknown
AA seq 119 aa
MDAKVVAVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKSNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKEKIGKKKRQKRRKAAQKRKN
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgccaaagtcgtcgccgtgctggccctcgtgctggccgcgctctgcctcagcgat
gggaaacccgtcagcctgagttacaggtgcccctgtcgattcttcgagagccacgtggcc
agagccaacgtcaaacatctcaagatcctcaacactcccaactgcgcccttcagattgtg
gcccggctgaagagcaacaaccggcaagtgtgcattgacccgaaattgaaatggatccag
gagtacctggagaaggccttaaacaaggggcgcagagaagaaaaagtggggaaaaaagaa
aagataggaaaaaagaagcgacagaagaggaggaaggcggcccagaaaaggaaaaactag

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