Ochotona curzoniae (black-lipped pika): 121152315
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Entry
121152315 CDS
T11174
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04514
Cell adhesion molecules
ocz04520
Adherens junction
ocz04910
Insulin signaling pathway
ocz04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121152315 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121152315 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121152315 (PTPRF)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
121152315 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocz01009
]
121152315 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocz04515
]
121152315 (PTPRF)
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121152315 (PTPRF)
Protein phosphatases and associated proteins [BR:
ocz01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121152315 (PTPRF)
Cell adhesion molecules [BR:
ocz04515
]
Immunoglobulin superfamily
Type II RPTP family
121152315 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
PTP-SAK
Tc-R-P
fn3_2
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DUF4998
Fn3_PTPRU
Insulin_TMD
Arylsulfotran_N
DUF3377
Motif
Other DBs
NCBI-GeneID:
121152315
NCBI-ProteinID:
XP_040830271
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MGPDPAPGRTMVPLVPALVMLGLVAGAHGDSKPVFVKVPEDQTGLSGGVASFVCQATGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
KLSVLEEEQLPSGFPTIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPTAS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSS
QEVMPGGNVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPIGRNVLELSGVTRSANYTCVA
ISSLGMIEATAQVTVKALPKPPIDVVVTETTATSVTLTWDSGNSEPVSYYGIQYRATGSE
GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRV
QARMLSASTMLVQWDPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGHLTTVGSLLP
GITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEAESDTRIQLSWLLPPQERI
VKYELVYWTADDEDQQQKVTFDPTSSYTLEDLKPDTLYHFQLAARSDLGVGVFTPTIEAR
TQQSTPSAPPQKVTCESTGSTTVRVSWVPPPADSRNGIITQYSVAYEAVDGEDRGRHVVD
GISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPL
NSTAVHVSWKLPIPSKQHGQIRGYQVTYVRLENGEPRGPPVIQDVMLAEAQWRPEESEDY
ETTISNLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTALLQW
HPPKELPGELLGYRLQYRRADEAQPNTIDFGKDDQHFTVTGLHKGATYIFRLAAKNRAGP
GEEFEKEITTPEDIPSGFPQNLHVIGLTTSTTELAWDPPVLAERNGRITNYTVVYRDINS
QQELQNITADTHLTLSGLTPDTTYDVKVRAHTSKGAGPLSPSIQSRTMPMDQVFAKNFRV
AAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNR
GSSAGGLQHLVTIRTAPDLLPYKPLHASAYIEDGRFSLSMPRVQDPSLVRWFYIVVVPIN
RMGENMLSPRWNTPEELELDELLEAIEQASVQQQQRRRRQAERLKPYVAARVDVLPETFT
LGDKKNYWGFYNRPLSPDLSYQCFVLASLKEPIDQKRYASSPYSDEIAIQVTPAQQQEEP
EMLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRL
NYQTPGMRDHPPIPVTDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKN
RYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETTGDFWRMVW
EQRTATIVMMTRLEEKSRVKCDQYWPVRGTETYGLIQVTLLDTAELATYTVRTFALHKSG
SSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFI
VIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARN
LYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELT
RVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLT
KLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQ
FTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERM
RYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgggccctgacccagccccagggaggacgatggtgcccctggtacccgcacttgtgatg
cttggtttggtggcaggtgcccatggggacagcaaacctgtgttcgttaaggtccctgag
gaccagacagggctgtcgggaggtgtggcttccttcgtgtgccaggccacaggggaaccc
aagccgcgcatcacgtggatgaagaaggggaagaaagtcagctcccagcgctttgaggtc
attgagtttgatgacggggcagggtccgtgctgcggatccagccgttgcgagtgcaacga
gacgaagccatctatgagtgcacagccaccaacagcctgggggagattaacaccagtgcc
aagctctcagtgcttgaagaggagcagctgccctctggcttccccaccatcgacatgggg
ccacagctgaaggtggtggagaaggcccgcacagcgactatgctgtgtgcagcaggcgga
aacccagacccagagatctcttggttcaaagacttcctgcctgtggaccctaccgcgagc
aatggccgcatcaagcagctgcgttcaggtgccttgcagattgagagtagtgaggagtca
gaccaaggcaagtacgagtgtgtggcgaccaactcagcgggcacacgctactcggcccct
gcaaacctgtatgttcgagtgcggcgcgtggctcctcgtttctccatccctcccagcagc
caggaggtgatgccaggtggcaatgtgaacctgacatgtgtcgctgtgggtgcacccatg
ccttacgtgaagtggatgatgggggccgaggagctcaccaaagaggacgagatgccaatc
ggccgcaacgtgctggagctcagcggggtcacacgctctgccaactacacatgtgtggcc
atctcctcgctgggcatgattgaagccacggcccaggtcacagtgaaagctttgccaaag
cctccaatcgatgttgtggtgacagagacaaccgccaccagtgtcaccctgacctgggac
tctgggaactcagaacctgtttcttactatggcatccaatatcgggccacaggctcagag
ggccccttccaggaggtggacggcgtggccaccacccgctacagcatcggcggcctcagc
cctttctccgagtatgccttccgcgtgctggcagtgaacagcatcggccggggaccgccc
agcgaggctgtgcgggcacggaccggcgagcaggcgccctccagcccaccacgccgtgtg
caagcccgcatgctgagcgccagcaccatgctggtacagtgggacccgccagaggagccc
aatggtctggtacgaggataccgcgtctactacaccccagactcacgccgccccctgagc
gcctggcacaaacacaacactgacgctggccatctcaccactgtgggcagcctgctgcca
ggcatcacatacagcctgcgtgtgctcgccttcactgctgtgggtgatggcccacccagc
cccacgattcaggtcaagacccagcagggagtgcctgcacagcctgcggacttccaggcc
gaggccgagtcggacaccaggatccagctgtcatggctgctgcccccacaggagcggatc
gttaaatacgagctggtgtactggaccgctgacgatgaagaccagcagcaaaaggtgacc
ttcgaccccacctcctcctacactctagaggacctgaagcctgacacactgtatcacttc
cagctggctgcccgttctgacctaggggtgggcgtcttcacccccaccattgaggcccgc
acccaacagtccaccccctccgcccctccccagaaggtgacgtgcgagagcacaggctct
accacggtccgggtaagttgggtcccaccaccagccgacagccgcaatggcatcatcaca
cagtactccgtggcctacgaggcagtggatggcgaggaccgtgggcgccacgtggtggat
ggcatcagccgcgaacactccagctgggacctggtgggcctggagaagtggacggagtac
cgggtgtgggtgcgggcacacacggacgtgggccccggccccgagagcagcccggtgctg
gtgcgcaccgacgaggacgtgcccagtgggcccccacggaaggtggaggtggagcccttg
aactccacagctgtgcacgtctcctggaaactgcccatccccagcaagcagcatggccag
atccgtggctaccaggtcacctacgtgcggctggagaatggcgagccccgcggcccacct
gtcatccaggacgtcatgcttgctgaagcccagtggcggccagaggagtccgaggactat
gagactaccatcagcaacctcaccccagagaccacctactccattaccgtggctgcgtac
accaccaagggggatggtgcccgaagcaagcccaagatcgttacaaccacaggggcagtc
ccaggccggcccaccatgatggtcagcaccacggccatgaacacggcgttgctccagtgg
cacccacccaaggagctgcccggcgagctgctgggctacaggctgcagtaccgccgggcc
gacgaggcacagcccaacaccatagattttggcaaggatgaccaacactttacggttact
ggcctacataagggagccacctacatcttccggcttgctgccaaaaaccgggccggccca
ggtgaagagtttgagaaggagatcacaacccctgaggacattcccagcggcttcccccaa
aacctgcacgtgatcggactgaccacgtccaccacggaactggcctgggacccgccggta
ctagccgagaggaatggccgcatcaccaactacactgtggtgtaccgcgacatcaacagc
cagcaggagctgcagaacatcactgccgacacccacctcacactctcaggccttacgcca
gacaccacttatgatgtcaaggttcgcgcacataccagcaagggtgccggcccgctcagc
cccagcatccagtcccggaccatgcccatggaccaagtgtttgccaagaacttccgagtg
gcagctgcaatgaagacatctgtgctgttgagctgggaggtccctgactcctacaagtca
gctgtacccttcaagattctatacaatgggcagagcgtggaggtagatggacactccatg
aggaagctgattgctgatctgcagcccaacactgagtactcgttcgtgctcatgaaccgg
ggcagcagcgcgggtggcctccagcaccttgtgaccatacgcacagcccctgacctccta
ccgtacaagccgctgcatgcctccgcctacatagaagatggccgcttttccctttccatg
ccgcgcgtgcaagacccctcactggtcaggtggttctacatcgtggtggtacccatcaac
cgcatgggcgagaacatgctgagcccaagatggaatacgcctgaggagctggagctggac
gagctcctggaagcgattgagcaagccagcgtgcagcagcagcagaggcggcggcgacag
gcagagcggctaaagccctatgtggccgcacgggtggatgtactcccggagaccttcacc
ctgggggacaagaagaactactggggcttctacaatcggcccctttctccagacctgagc
taccagtgctttgtgctcgcctcgctgaaggaacccatagaccagaagcgctacgcctcc
agcccctactcggatgaaattgcaatccaggtgactccagcccagcagcaggaggagcct
gagatgctgtgggtgacaggccctgtgctggctgtgatcctcatcatcctcatcgtcatc
gccatcctgctgttcaagaggaagaggacccactccccgtcatcgaaggatgagcagtcc
atcgggctgaaggactctctgctggcccactcttctgaccccgtggagatgcggaggctc
aactaccagaccccaggtatgcgagaccacccgcccattcccgtcactgacctggctgac
aatatcgaacgtctcaaggccaacgatggcctcaagttctcccaggagtacgagtccata
gaccctggacaacagttcacctgggagaattccaacctggaggtgaacaagcccaagaac
cgttatgcgaatgttattgcctacgaccactcccgtgtcatcctcacctccatcgatggt
gtccctggcagcgactacatcaatgccaactacatcgatggctatcgtaagcagaacgcc
tacattgccacgcaaggcccactaccagagaccacgggtgacttctggcggatggtgtgg
gagcagcgcacggccaccatagtcatgatgaccaggctggaggagaagtcccgggtgaag
tgtgaccagtactggccggtgagaggcaccgaaacatacggccttattcaggtgaccctg
ttggacacagcggagctagccacatacactgtgcgcacctttgcactccacaagagtggc
tccagtgagaagcgggagctccgtcagttccagttcatggcttggccagaccacggggtc
ccagagtacccaactcccatcctggctttcctgcgccgggtcaaggcgtgcaacccgcta
gatgcagggcccatggtggtgcactgcagcgcgggtgtgggccgcactggctgcttcatc
gtcattgacgccatgctggaacggatgaaacatgagaagacggtagacatctatggccac
gtgacatgcatgcgctcccagaggaactacatggtgcagacggaggaccagtatgtgttc
atccatgaggcgctgctggaggctgccacatgtggacacacagaagtgcccgcccgcaac
ctgtatgcccacatccagaagctgggccaagtgcctcccggggagagcgtgaccgctatg
gagcttgaattcaagttgctggccagctccaaggcccacacgtctcgcttcatcagcgcc
aacctgccctgcaacaagttcaagaaccgtctagtgaacatcatgccctatgagttgacc
cgcgtgtgtctgcaacccatccggggcgtggaaggttccgattacatcaatgccagcttc
ctggatggctataggcaacagaaggcctacatagccacacaggggcctctggctgagagc
accgaggacttctggcgcatgttgtgggaacacaactccaccatcattgtcatgctgacc
aagctgcgtgagatgggcagggagaaatgccaccagtactggccagcagagcgctctgct
cgctaccagtacttcgtggtcgaccccatggctgagtacaacatgccccagtacatcctg
cgagagttcaaggtcacggacgcccgggatggacagtcaaggaccatccggcagttccag
ttcacagactggccagagcagggcgtgcccaagacaggcgagggctttatcgacttcatt
ggacaggtgcacaagaccaaggagcagtttgggcaggatgggcccatcacggtgcactgc
agcgctggggtgggccgcactggggtgttcatcacactgagcattgttctggagcgcatg
cgctatgagggcgtggtcgacatgttccagaccgtgaaaaccctgcgcacgcagcgtcct
gccatggtgcagacggaggaccagtaccagctgtgctaccgtgctgccctggagtacctc
ggcagctttgaccactatgcaacgtaa
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integrated database retrieval system
