Ochotona curzoniae (black-lipped pika): 121152971
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Entry
121152971 CDS
T11174
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz02010
ABC transporters
ocz04146
Peroxisome
ocz04977
Vitamin digestion and absorption
ocz04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121152971 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121152971 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121152971 (ABCD4)
04980 Cobalamin transport and metabolism
121152971 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121152971 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocz02000
]
121152971 (ABCD4)
Enzymes [BR:
ocz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
121152971 (ABCD4)
Membrane trafficking [BR:
ocz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121152971 (ABCD4)
Transporters [BR:
ocz02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
121152971 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
SbmA_BacA
AAA_30
AAA_22
DEAD
IRK
AAA_29
AAA_23
nSTAND3
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
121152971
NCBI-ProteinID:
XP_040831225
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAAPRSAPRVGARPRLDLRFLQRFLKIQEVLFPSWSSQNVLMFVTLLMVALLEQLVIYRV
GLIPSQYYGVLGNKDLDGFKALTFLAVVLIVVNSTLKSLDQFTCNLLYVSWRRDLTEHLH
RLYFQGRVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSMASQLIISPFTLIYYTYQCFR
STGWLGPVSIFGYFILGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEAAAFYR
AGQVEHMRTDRRLQRLLQTQRELMAKELWLYIGVNTFDYLGSILSYVVIAIPIFSGVFGD
LTPTELSALVSKNAFVCIYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSSKSQD
CDTLGNSEWDLDKVPGWPAAEPADAAFLLDRACISAPSSDKPLIKDLSLKVCEGQSLLIT
GNTGTGKTSLLRVLGGLWTSTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSTDDERIMRFLDLAGLSSLVTRTEGLDQQVDWNWYDVLSPGEMQRLSFTRLFYL
QPKYAVLDEATSALTEEVEAELYRIGQQLGMTFISVGHRRSLEKFHSLVLKLCGEGRWEL
SRLKGE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccccggtccgctcccagggtaggcgccaggcccagattagacctgaggttc
ctccagcgattcctgaagatccaggaggttctgtttccctcgtggtcgtcacagaacgtc
ttgatgttcgtcaccctcctcatggtggctctcctggaacaactggtgatctaccgggtg
ggcctgatccccagtcagtactatggggtcctgggaaacaaagacctggatgggttcaag
gccctgacgttcctggccgtggtgctcatcgtggtcaactccacgctgaagagccttgac
cagttcacctgcaacctgctgtatgtgagctggaggagggacctcaccgagcacctgcac
cgcctctacttccagggccgcgtgtactacaccctgaacgtgctgcgggacgacatcgat
aacccggaccagcgcatcagccaggatgtggagcgattctgccggcagctcagcagcatg
gccagccagctcatcatctcccccttcacactcatctactacacctaccagtgcttccgg
agcacagggtggcttgggcccgtgagcatcttcggctatttcatcctgggaaccatggtg
aacaaaacactgatggggcctattgtgacgaagctggtgcagcaagagaagctggagggg
gatttccggttcaaacacatgcagattcgggtgaatgctgaggctgctgctttctaccga
gctggacaggtggagcacatgaggaccgaccgccggttgcagaggctgctgcagacccag
agggagctgatggccaaggagctctggctatacattggtgtcaacaccttcgactacctg
ggcagcatcttgagttatgtggtcattgcaatccccatcttcagtggggtcttcggagac
ttgaccccaacagagctcagtgcgctggtcagcaagaacgccttcgtgtgcatctacctc
atcagctgcttcacccggctcatcgacctgtccaccacgctctctgacgtggctgggtac
acacacaggattggggaacttcaggagaccctgctggacatgtcctccaaatcgcaggac
tgtgatactttgggcaacagtgagtgggacttagacaaggtcccagggtggccagcagca
gagcccgctgacgcagccttcctcctggaccgggcctgcatctcagccccctcctcggac
aagccactcatcaaggacctgagcttgaaggtctgcgagggccagagcctgctcatcaca
ggcaacacgggcacgggcaagacctccctgctgcgggtgctgggcggcctgtggaccagc
acacggggctctgtacagatgctcacagacttcgggccccatggggtgctgttcctgcca
cagaaacccttcttcactgacgggaccctccgtgagcaggtgatttaccccctaaaggag
atctacccagactcaggttctactgacgatgagaggatcatgaggtttttggacttggcg
ggcctgtccagcttggtgaccaggacagagggtctcgaccagcaggtggattggaactgg
tacgacgtcctgtccccaggggagatgcagaggctgtccttcacccggcttttctacctg
cagcccaagtatgcagtgcttgatgaagccaccagcgcactgaccgaggaggtggaggct
gagctgtaccgcattggccagcagctgggcatgaccttcatcagtgtggggcatcggcgc
agcctagagaagtttcactctttggttctgaaactctgtggagaaggaagatgggagctg
agcagacttaagggggagtga
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