KEGG   Ochotona curzoniae (black-lipped pika): 121161949
Entry
121161949         CDS       T11174                                 
Symbol
TNF
Name
(RefSeq) tumor necrosis factor isoform X1
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz01523  Antifolate resistance
ocz04010  MAPK signaling pathway
ocz04060  Cytokine-cytokine receptor interaction
ocz04061  Viral protein interaction with cytokine and cytokine receptor
ocz04064  NF-kappa B signaling pathway
ocz04071  Sphingolipid signaling pathway
ocz04150  mTOR signaling pathway
ocz04210  Apoptosis
ocz04217  Necroptosis
ocz04350  TGF-beta signaling pathway
ocz04380  Osteoclast differentiation
ocz04612  Antigen processing and presentation
ocz04620  Toll-like receptor signaling pathway
ocz04621  NOD-like receptor signaling pathway
ocz04622  RIG-I-like receptor signaling pathway
ocz04625  C-type lectin receptor signaling pathway
ocz04640  Hematopoietic cell lineage
ocz04650  Natural killer cell mediated cytotoxicity
ocz04657  IL-17 signaling pathway
ocz04660  T cell receptor signaling pathway
ocz04664  Fc epsilon RI signaling pathway
ocz04668  TNF signaling pathway
ocz04920  Adipocytokine signaling pathway
ocz04930  Type II diabetes mellitus
ocz04931  Insulin resistance
ocz04932  Non-alcoholic fatty liver disease
ocz04933  AGE-RAGE signaling pathway in diabetic complications
ocz04936  Alcoholic liver disease
ocz04940  Type I diabetes mellitus
ocz05010  Alzheimer disease
ocz05014  Amyotrophic lateral sclerosis
ocz05020  Prion disease
ocz05022  Pathways of neurodegeneration - multiple diseases
ocz05132  Salmonella infection
ocz05133  Pertussis
ocz05134  Legionellosis
ocz05135  Yersinia infection
ocz05140  Leishmaniasis
ocz05142  Chagas disease
ocz05143  African trypanosomiasis
ocz05144  Malaria
ocz05145  Toxoplasmosis
ocz05146  Amoebiasis
ocz05152  Tuberculosis
ocz05160  Hepatitis C
ocz05161  Hepatitis B
ocz05163  Human cytomegalovirus infection
ocz05164  Influenza A
ocz05165  Human papillomavirus infection
ocz05166  Human T-cell leukemia virus 1 infection
ocz05168  Herpes simplex virus 1 infection
ocz05169  Epstein-Barr virus infection
ocz05170  Human immunodeficiency virus 1 infection
ocz05171  Coronavirus disease - COVID-19
ocz05205  Proteoglycans in cancer
ocz05310  Asthma
ocz05321  Inflammatory bowel disease
ocz05322  Systemic lupus erythematosus
ocz05323  Rheumatoid arthritis
ocz05330  Allograft rejection
ocz05332  Graft-versus-host disease
ocz05410  Hypertrophic cardiomyopathy
ocz05414  Dilated cardiomyopathy
ocz05417  Lipid and atherosclerosis
ocz05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121161949 (TNF)
   04350 TGF-beta signaling pathway
    121161949 (TNF)
   04064 NF-kappa B signaling pathway
    121161949 (TNF)
   04668 TNF signaling pathway
    121161949 (TNF)
   04071 Sphingolipid signaling pathway
    121161949 (TNF)
   04150 mTOR signaling pathway
    121161949 (TNF)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121161949 (TNF)
   04061 Viral protein interaction with cytokine and cytokine receptor
    121161949 (TNF)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    121161949 (TNF)
   04217 Necroptosis
    121161949 (TNF)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    121161949 (TNF)
   04620 Toll-like receptor signaling pathway
    121161949 (TNF)
   04621 NOD-like receptor signaling pathway
    121161949 (TNF)
   04622 RIG-I-like receptor signaling pathway
    121161949 (TNF)
   04625 C-type lectin receptor signaling pathway
    121161949 (TNF)
   04650 Natural killer cell mediated cytotoxicity
    121161949 (TNF)
   04612 Antigen processing and presentation
    121161949 (TNF)
   04660 T cell receptor signaling pathway
    121161949 (TNF)
   04657 IL-17 signaling pathway
    121161949 (TNF)
   04664 Fc epsilon RI signaling pathway
    121161949 (TNF)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    121161949 (TNF)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    121161949 (TNF)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    121161949 (TNF)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    121161949 (TNF)
   05170 Human immunodeficiency virus 1 infection
    121161949 (TNF)
   05161 Hepatitis B
    121161949 (TNF)
   05160 Hepatitis C
    121161949 (TNF)
   05171 Coronavirus disease - COVID-19
    121161949 (TNF)
   05164 Influenza A
    121161949 (TNF)
   05168 Herpes simplex virus 1 infection
    121161949 (TNF)
   05163 Human cytomegalovirus infection
    121161949 (TNF)
   05169 Epstein-Barr virus infection
    121161949 (TNF)
   05165 Human papillomavirus infection
    121161949 (TNF)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121161949 (TNF)
   05135 Yersinia infection
    121161949 (TNF)
   05133 Pertussis
    121161949 (TNF)
   05134 Legionellosis
    121161949 (TNF)
   05152 Tuberculosis
    121161949 (TNF)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    121161949 (TNF)
   05144 Malaria
    121161949 (TNF)
   05145 Toxoplasmosis
    121161949 (TNF)
   05140 Leishmaniasis
    121161949 (TNF)
   05142 Chagas disease
    121161949 (TNF)
   05143 African trypanosomiasis
    121161949 (TNF)
  09163 Immune disease
   05310 Asthma
    121161949 (TNF)
   05322 Systemic lupus erythematosus
    121161949 (TNF)
   05323 Rheumatoid arthritis
    121161949 (TNF)
   05321 Inflammatory bowel disease
    121161949 (TNF)
   05330 Allograft rejection
    121161949 (TNF)
   05332 Graft-versus-host disease
    121161949 (TNF)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    121161949 (TNF)
   05014 Amyotrophic lateral sclerosis
    121161949 (TNF)
   05020 Prion disease
    121161949 (TNF)
   05022 Pathways of neurodegeneration - multiple diseases
    121161949 (TNF)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    121161949 (TNF)
   05418 Fluid shear stress and atherosclerosis
    121161949 (TNF)
   05410 Hypertrophic cardiomyopathy
    121161949 (TNF)
   05414 Dilated cardiomyopathy
    121161949 (TNF)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    121161949 (TNF)
   04940 Type I diabetes mellitus
    121161949 (TNF)
   04936 Alcoholic liver disease
    121161949 (TNF)
   04932 Non-alcoholic fatty liver disease
    121161949 (TNF)
   04931 Insulin resistance
    121161949 (TNF)
   04933 AGE-RAGE signaling pathway in diabetic complications
    121161949 (TNF)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    121161949 (TNF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocz04052]
    121161949 (TNF)
   00536 Glycosaminoglycan binding proteins [BR:ocz00536]
    121161949 (TNF)
Cytokines and neuropeptides [BR:ocz04052]
 Cytokines
  Tumor necrosis fators
   121161949 (TNF)
Glycosaminoglycan binding proteins [BR:ocz00536]
 Heparan sulfate / Heparin
  Cytokines
   121161949 (TNF)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 121161949
NCBI-ProteinID: XP_040844609
LinkDB
Position
Unknown
AA seq 233 aa
MSTENMIRDVELAEGQLPKKTEASQGSKRCLCLSLFSFLLVAGATTLFCLLHFGVIGPQG
EEQFPKNLHLVNPLAQTLRSASRTPSDKPVAHVVANPQKEGQLEWLSQRANALLANGLKL
IDNQLVVPRDGLYLVYSQVLFKGQACPSYLLLTHTVSRFAVSYPNKVNLLSAIKSPCQKE
TPEGTEPMAWYEPIYQGGVFQLEKGDRLSTEVNLPDYLDLAESGQVYFGIIAL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgagcactgaaaacatgatccgggacgtggagctggcggagggacagctccccaagaag
acagaggcctcccaaggttccaagcgttgcctgtgtctcagcctcttctccttcttgctt
gtggcgggagccaccacgctcttctgcctgctgcacttcggagtgatcggccctcagggc
gaagagcagttcccaaagaacctccatctagtcaaccctctggcccagaccctcagatca
gcttctcgcaccccaagtgacaagcccgtagcccacgtagtagcaaacccacaaaaggag
ggccaacttgagtggctgagccagcgcgctaacgccctcctggccaatggcctgaagctg
atagacaaccagctggtggtgcccagggatgggctctacctcgtctactcccaggtgctc
ttcaagggtcaagcctgcccttcctacttgctccttactcacacggtcagccgcttcgct
gtctcctacccgaacaaggtcaacctcctttctgccatcaagagcccctgccagaaggag
acccccgaggggactgagcccatggcctggtatgagcccatctaccagggtggagtcttc
cagctggagaagggagaccgactcagcaccgaagtcaatctgcccgactatcttgacctg
gccgagtcagggcaggtgtactttggcatcattgccttgtga

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