Ochotona curzoniae (black-lipped pika): 121163901
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Entry
121163901 CDS
T11174
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04217
Necroptosis
ocz04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121163901
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121163901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121163901
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
121163901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121163901
NCBI-ProteinID:
XP_040847569
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MAPPAGGAAGTGAAAGSSSAAVLLAVHAEVLPLDAGAGAEAQLRRLQLRADPERPGRLRL
DVLGAGPGAVGWQWPLESVSYAVRGPSQHELQPPPGGPGALRLQFLSSQEAQRWAALVQG
ASLDGQDGSGSPPPAPPSPPEAPTPRAPQHEVDLPWSSGGQVENEELAGRLARAIEAGDE
EGAAHAAAALAQHHAALSVRLQETCFPLGSLRLQVTVEDAASAASMASSAHISLQVHPYS
TIAALREQVFSEFGFPPAVQRWVIGRCLCIPERSLASYGIRHDGDPAFLYLLSATGESPG
FSPQRPLKTEGELRHLCGQPQGLPGAQPASSSLPSPLQPGWPCPSCTFINALSRPGCEMC
SAQRPCAWDPLLPASA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggccggaggggccgcggggaccggagcggccgcggggtccagctctgcc
gccgtgctgctagccgtgcacgccgaggtgctgccgctcgacgccggcgccggggccgag
gcgcagctgcggcggctgcagctgcgcgccgaccccgagcggcccgggcgcctgcggctg
gacgtgctgggcgcggggccgggcgcggtcggctggcagtggcccctggagtccgtgtcc
tacgccgtgcggggccccagccagcacgagctgcagcctcccccgggcggccccggcgcg
ctccggctgcagttcctcagctcgcaggaagcgcagcgctgggcggccctggtccagggg
gcctcgctggacggacaggacggcagtggcagcccacccccagccccacccagtccccct
gaggcccccacgcccagagccccccagcatgaggtggatctgccctggagctccggcggc
caggtggagaacgaggagctggcgggacgcctggcccgggccatcgaagctggagatgag
gagggggcggcccacgcggcagccgcgctagctcagcatcacgcggccctcagtgtgcgg
ctacaggagacctgctttcccctggggtccctcaggctgcaggtcacagttgaggacgcc
gcgtccgctgcatccatggcgtcatcagcccacatctcgctgcaggtccacccgtacagc
accattgccgccctgcgggagcaagtgttctccgagtttggcttcccgcctgccgtgcag
cgctgggtcatcgggcggtgcctgtgtatccctgaacgtagcctggcctcctacggcatc
cggcacgacggagaccctgccttcctctacctgctgtcagccaccggagagtcgccaggg
ttcagccctcagcggcccctgaagacagaaggggagctgaggcacctatgtggccagcca
caggggctgccaggggctcagccggccagctccagcctccccagccccttgcagcccggc
tggccctgtccttcatgtaccttcatcaacgccctgagccgcccaggctgtgagatgtgc
agcgcccagagaccctgtgcatgggaccccctgctcccagcttccgcctag
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