KEGG   Ochotona curzoniae (black-lipped pika): 121165676
Entry
121165676         CDS       T11174                                 
Symbol
TREX1
Name
(RefSeq) three-prime repair exonuclease 1
  KO
K10790  three prime repair exonuclease 1 [EC:3.1.11.2]
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    121165676 (TREX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocz03400]
    121165676 (TREX1)
Enzymes [BR:ocz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     121165676 (TREX1)
DNA repair and recombination proteins [BR:ocz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    121165676 (TREX1)
SSDB
Motif
Pfam: RNase_T Herpesvir_UL11
Other DBs
NCBI-GeneID: 121165676
NCBI-ProteinID: XP_040850346
LinkDB
Position
Unknown
AA seq 311 aa
MMGSQTPPPELVQTLIFLDLEATGLPFSQPKITELCLLAVHRCALESPSTSQSPVPPPPR
VVDKLSLCVAPGKACSPTASKITGLSTAVLQAHGRQPFDDSLASLLLAFLRRQPAPWCLV
AHNGDGYDFPLLQAELAMLGCASILDRAFCVDSMAALKALEQAESPSAHSPRKSYSLGNI
YTRLYGQEPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFSTVKPMYEATASRTSP
RPSARTTMTRLHAAKNTSASPSRSKKSTALPTPKDPGDLPRGELLASLGLLAFLTLAVAT
LYELFLAPQGQ
NT seq 936 nt   +upstreamnt  +downstreamnt
atgatgggctcgcagaccccacccccagagcttgtacagacccttatcttcttggacctg
gaggccactggactgcccttctcccagcccaagatcacagagctgtgcctgcttgctgtc
cacagatgtgccctggagagcccttccacttcccagagtccagtgccccccccaccccga
gtggtggacaagctctccctatgtgtggccccgggaaaggcctgtagccccacagccagc
aagatcacaggcttgagcacagccgtgctgcaagcgcatgggcgtcagcccttcgacgac
agcctggccagcctgctcctggctttcctgcggcgccagccagcgccctggtgcctcgtg
gcacacaatggtgacggctatgactttcccctgctgcaggcagagctggccatgctgggc
tgtgccagcatcctggacagagccttctgtgtggacagtatggctgccctcaaggcccta
gaacaagctgagagcccctcggcgcacagccccaggaagagctacagcctgggcaacatc
tacacacgcctgtacgggcaggagccaccagactcccacacagctgagggtgacgtcctg
gccctgctcagtatctgccagtggaggccccaggctctgctccgctgggtggatgctcac
gccagacccttcagcactgtcaagcccatgtatgaggccactgcttcgaggaccagcccg
cggccatctgctagaacaaccatgacacgcctacatgccgccaagaacaccagtgccagc
cccagcaggagtaagaagtccacagctcttcctacacccaaggaccctggagacctgccc
agaggtgagctgctggcctccctgggcctgctggctttcttgaccttggcagtagccaca
ctgtatgaactgttcctggccccacaggggcagtag

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