Ochotona curzoniae (black-lipped pika): 121165892
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Entry
121165892 CDS
T11174
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03018
RNA degradation
ocz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121165892 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
121165892 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121165892 (LSM3)
03041 Spliceosome [BR:
ocz03041
]
121165892 (LSM3)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121165892 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
121165892 (LSM3)
Spliceosome [BR:
ocz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121165892 (LSM3)
Complex C
U2 snRNP components
121165892 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
121165892
NCBI-ProteinID:
XP_040850834
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDVDQQQTSNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaaccagcaacaccgtggaggagccgctggatctc
atccggctcagcctggacgagcgcatctacgtgaagatgaggaatgaccgagagctccgg
ggccggctccatgcttacgatcagcatttaaatatgatactaggagatgtggaagaaacg
gtgactaccatagaaattgatgaagaaacctatgaagagatttataaatccaccaagcgg
aacatcccgatgctctttgtccggggagacggcgtggtgctggtggcccctccactgcgg
gtcggctga
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integrated database retrieval system
