Ochotona curzoniae (black-lipped pika): 121168860
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Entry
121168860 CDS
T11174
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz00310
Lysine degradation
ocz01100
Metabolic pathways
ocz04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121168860 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
121168860 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121168860 (SETDB1)
Enzymes [BR:
ocz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
121168860 (SETDB1)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121168860 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121168860 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Chromo
Motif
Other DBs
NCBI-GeneID:
121168860
NCBI-ProteinID:
XP_040855283
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MSSLPGCVGLGAAAAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVLQKESEVALVDQLFDDASRAVTNCESLVKDFYSKLGLQYRESSSEDEASGPT
EIIEIPDEDDEVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKESFVTSVNRSWLYVHGTLSQMSSELSRDGDLVVSMRILGKKRTKTWHKGTLIAIQTVG
PGKKYKVKFDNKGKSLLSGNHIAYDYHPPAEQLFVGSRVVAKYKDGNQVWLYAGIVAETP
NVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPM
VLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSS
ASTLEKKQGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPPPAPPAPALSP
QIGDPDMESQLAQSRKQVAKKSTSFRPGSVGSGHSSPPSPALSESAAGGKPAANQAYRSP
LSSTTSAPAPPVPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPM
RNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETG
CDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSK
ERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCVCHQLTIQATACTPGGQINPNSGYQYKR
LEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFV
CIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQE
DGNSGTEDPEESNDDSSDDNFCKDEDFSTGSVWRSYATRRQTRGQKENGLSEMPAKDSRP
PDLGPPHVPVPPPLVPAGVCNPPSSEETPKNKVASWLSCNSVNDGVFDSDSRSSFKTGEG
GAGGSRGEAEKSSTSAPGVKDEGDTKQAKKEDPDDRNKIPGITESSRNYGYNPSPVKLEG
LRRPPSKTSLHQSRRLAASAQPGADDVLTLSSSTDSEGESGTSRKPTAGQTAATAVDSDD
IQTISSGSEGDDFEDKKNLSGPAKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGDSAP
VRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFAS
KRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccctccctggctgtgtgggtttgggtgccgccgcggctgccgtggagtctgag
gagatcgccgagctgcagcaggcggtggtggaggagctgggcatctccatggaggagctg
cggcagttcatcgatgaggagctggagaagatggactgcgtgcagcagcgcaagaagcag
ctagccgagctggagacgtgggtgttacagaaagagagcgaggtggctctagtcgaccag
ctctttgatgacgcctccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggcctgcagtaccgagagagtagctctgaagatgaggcttctgggcctaca
gaaataattgagattcctgatgaagatgatgaagtcctcagcatcgattcaggtgatgct
gggagcagaactccaaaagatcagaagctccgtgaggccatggctgccttaagaaaatca
gctcaggatgtccagaagttcatggacgctgtcaacaaaaagagcagctcccaggatctg
cataaagaatcctttgttacctctgttaatagaagctggctgtatgtccatggaaccttg
agtcagatgtcgagtgagctgagcagagatggtgacctggtagtcagcatgcggattctg
ggcaagaagagaaccaagacgtggcacaaaggcaccctgattgccatccagacagttggg
ccagggaagaagtacaaggtgaaatttgacaacaaaggaaaaagtctactgtcagggaac
cacatcgcctatgactaccaccctcctgctgagcagctgtttgtgggcagccgagtggtg
gccaaatacaaagatgggaaccaggtctggctctatgctggcattgtagccgaaacacca
aacgtcaaaaacaagctcaggttcctcattttctttgatgatggctacgcgtcttacgtc
acacagtctgaactatatcccatttgccggccactgaaaaagacttgggaagatatagaa
gacatctcctgccgagacttcatagaggagtatatcactgcttaccctaaccgccccatg
gtgctgctcaagagtggacagcttatcaagactgagtgggagggcacctggtggaagtca
cgtgttgaggaggtggatgggagcctcgtcaggatcctcttcttggatgacaaaagatgt
gagtggatctatcgaggctccacacgactggagcccatgttcagcatgaagacctcttcg
gcctctacgctggagaagaaacaagggggacagctccggacacgtccaaatatgggtgct
gtgaggagcaaaggccctgtagtccagtatacacaggatctgaccagtactggaacccag
ttcaagccaatggagcccccgcagcctcctccagctccacctgctccagctctgtcccct
caaataggtgaccctgacatggaaagccagcttgctcaatcacggaagcaggtagccaaa
aagagcacatcctttcgaccaggatctgtgggctctggtcactcctcccctccgtcccct
gcactcagtgagagtgctgctggtgggaagcctgcagcgaaccaggcatatagatcacct
ttaagttcaacaacttctgccccagcacctccagtccccccggctcctcccgcaccccca
gctttccatggcatgctggagcgggccccagcggagccctcctaccgtgcccccatggag
aaacttttctacttacctcatgtctgcagctatacgtgtttgtctcggatcagacccatg
aggaatgagcagtaccggggcaagaacccgttgctcgtcccgctgctatatgacttccga
cgaatgacagcccggcgccgggttaaccgcaaaatgggcttccatgtcatctataagacc
ccctgtggcctctgcctccggacaatgcaggagattgaacgctacctgtttgaaactggc
tgtgacttcctcttcctggagatgttctgtttggatccctatgttcttgtggaccgcaag
tttcagccctataagcctttttactatattttggacatcacctatggaaaggaggatgtt
cccctatcctgtgtcaatgaaattgacacaactcccccaccacaggtggcttacagcaag
gaacggatcccgggcaagggtgttttcattaacacaggccctgaatttctggttggctgc
gactgcaaggatgggtgtcgggacaaatctaagtgtgtctgccatcagctaactatccag
gctactgcttgtaccccaggaggccaaatcaaccctaactctggctaccagtacaaaaga
ctggaagagtgtctgcccacaggggtgtatgagtgtaacaaacgctgcaaatgtgaccca
aacatgtgcacaaatcggttggtgcagcacggactacaggttcgcctgcagctgttcaag
acacagaacaagggctggggtattcgctgcttggatgacattgccaaaggctcttttgtc
tgtatttatgcaggcaaaatcctgactgatgactttgcagacaaggagggcctggaaatg
ggtgatgagtattttgccaatctggaccatatcgagagcgtggagaacttcaaggaaggc
tatgagagtgatgccccctgttcctctgacagcagtggtgtagacttaaaggaccaggag
gatggcaacagcggtacagaggaccctgaggagtccaatgacgatagctcagatgataac
ttctgtaaggatgaggacttcagcaccggctcagtgtggcgcagctatgccacccggagg
cagacccgaggccagaaggaaaacggactctctgagatgcctgccaaggactcccgtccc
ccagaccttgggccaccacatgtccctgtccctcctcccttagtccctgcaggtgtctgc
aatccaccttcctccgaggagacacccaagaataaggtggcctcctggctgagctgcaat
agtgtcaacgatggggtctttgactctgatagccgctcctccttcaagactggcgaaggt
ggtgccgggggcagtcgaggggaagctgagaaatcctccacatcagcacctggtgtcaag
gatgagggagacaccaagcaagcaaagaaagaggaccctgatgaccgaaacaagatacca
ggaattacagaaagctctcgaaattatggttacaatccttctcctgtgaaactagaaggc
cttcgccgcccaccaagtaagacgagtctgcaccagagccggcgactcgcggcctctgct
cagcccggcgccgatgacgtcctgacgctatccagcagcacagacagtgagggggaaagt
gggaccagccgcaagcccactgctgggcagactgcagccacggcagtggacagcgatgac
atccagaccatctcctctggctccgaaggggatgactttgaggacaaaaagaacctatct
ggtccagcaaagcgccaggtggcagtaaaatcaacccgaggctttgctcttaaatcgacc
catgggattgccattaagtcaaccaacatggcctccgtggaaaagggggacagtgcacca
gttcgtaaaaacacacgccagttctacgatggtgaggagtcttgttacatcattgatgcc
aagctggaaggcaacctgggccgctacctcaatcacagttgcagccccaacctgtttgtc
cagaatgtcttcgtggacactcatgatcttcgcttcccctgggtggccttctttgccagc
aagagaatccgggctgggacagaacttacttgggactacaactatgaggtgggcagcgtg
gaaggcaaggagctcctctgctgctgcggagccatcgagtgcagagggcggcttctctag
DBGET
integrated database retrieval system
