Ochotona curzoniae (black-lipped pika): 121169367
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Entry
121169367 CDS
T11174
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
ocz04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
121169367 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
121169367 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocz01009
]
121169367 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocz04040
]
121169367 (TRPC5)
Protein phosphatases and associated proteins [BR:
ocz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121169367 (TRPC5)
Ion channels [BR:
ocz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121169367 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
121169367
NCBI-ProteinID:
XP_040855876
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGHWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKQPRRSLSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACQGPPLIRTMPRAGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVRGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLIMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtattacaaaaaggtcaactattcaccatacagagaccgcatccccctg
caaattgtgagggctgagacagaactctctgcagaggagaaggccttcctcaatgccgtg
gagaagggggactacgccactgtgaagcaggccctacaggaggctgaaatctactacaat
gtcaacatcaactgcatggaccctctgggccgcagcgccctgctcattgccattgagaat
gaaaacttggagatcatggaactgctgctgaaccacagtgtgtacgtaggggacgcactg
ctttatgccatccgcaaggaagtagtgggtgctgtggagctgctactcagctacaggaag
cccagtggagaaaagcaggtgcccactctgatgatggatacccagttctctgagttcaca
ccagacatcactccaattatgctggctgcccacaccaacaactatgaaatcatcaagttg
cttgtccagaaacgggtcacaatcccacggccgcaccaaatccgctgcaactgtgtcgag
tgtgtatccagctcagaagtagatagcctgcgccattctcgttcccgactgaacatctac
aaggcattagcaagcccctccctcattgccttatcaagtgaggaccccatcctaacggcc
ttccgactgggctgggagctcaaggagctcagcaaagtggagaatgagttcaaggctgag
tatgaggagctctcccagcagtgcaagctctttgccaaagacttgctggatcaagcccgg
agctcccgggagctggaaatcatcctcaaccacagagatgaccacagtgaagaacttgat
cctcagaagtaccatgatctggctaagctgaaggtggcaatcaagtaccaccagaaagag
tttgttgctcaacccaactgccaacagttgcttgccaccttgtggtacgacggcttccca
ggatggcggcggaaacactgggtagtcaagcttctgacatgcatgaccatcgggttccta
tttcccatgctttctatagcctatctgatctcacccagaagcaacctcgggctgttcatc
aagaaaccctttatcaagttcatctgccacacagcgtcctatctgaccttcctcttcatg
cttctcctggcttctcagcacatcgtcagaacagacctccatgtacagggacctccccca
actgtcgtagaatggatgatattgccctgggttctaggttttatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactccctctacttggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccgactctgattgcagaagca
ctctttgcaatatccaacattttgagttcattgcgcctcatatccctgttcacagccaac
tctcacttggggcctctgcagatctctttgggacgcatgctacttgatatcctcaaattc
ctctttatctactgcctggtactgctggcctttgccaacggactgaaccagctttacttt
tattatgagacaagagctatcgatgagcctaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacgctcttcgaaaccctgcagtcactcttctggtccgtgttc
ggccttttaaatctttatgtcaccaatgtgaaagccagacacgagttcactgagtttgtg
ggtgctaccatgtttgggacgtacaatgtcatctccttggttgtgctgctgaacatgctg
attgcaatgatgaacaactcctaccaactcattgccgatcatgctgatattgagtggaag
tttgcaaggacaaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacatcatccccagccccaagtcatttctataccttggccactggttcaacaacacc
ttctgccccaagagagaccctgatggccgacggagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaatcagcattatcaggaagttatcaggaattta
gtaaaaagatacgtggctgctatgataagaaattccaaaacaaatgagggactaaccgag
gagaattttaaggaactgaagcaggacatctccagctttcgatatgaagtgcttgacctc
ttaggaaatcgaaaacagcccaggagaagcctatccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatttaggctgtaagaaaaaggcctgccaggggccacctctcatcagaaccatgccgaga
gccggtggtgctcaagggaagtcaaaagctgagtcgtcaagcaaacgctctttcatgggc
ccttctctcaagaaattgggcctcctattctccaagtttaatggtcatatgtctgaaccc
agttcagaaccaatgtacaccatttctgatggaatcgtgcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagcgaaatt
aacctcagcgaggtagaattaggtgaagtgcggggcgctgctcagagcagtgaatgccct
ttagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactc
ttagactcctccgaggatgtatttgaaacttggggagaggcttgtgacttgatcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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